| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2885 |
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| Symbol | |
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| ID | 5422333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3210387 |
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| End bp | 3211070 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640882139 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001417781 |
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| Protein GI | 154246823 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.144779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.102082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAGAA GACCCTCCGT TCACTACGGC AAGACGCCCG AACCTGAGAC GCCCTACCAG
CGCGCCGCTC AGGTCTGGGA TGAGCGCATC GGCGCCGCGC GCGTTCAGGC CAAGAACTGG
CGCTTCATGG CGTTCGGCTC GCTGATCCTG TCCGCTGGTT TCGCGGCGGC GCTTGTCTGG
CAATCGGCGC GCGGAACGAT CGTCCCTTGG GTCGTTCAGG TCGACAGGCT CGGCCAGGCG
CAGGCAGTCG CGCCCGCTGT CGCCGACTAT CGTCCGACTG ACCCGCAGAT CGCCTTCCAT
CTCGCGCGCT TCATCGAGCA GGTTCGATCG ATTCCGTCCG ACGCTATCAT CGTCCGGCAG
AATTGGCTGC GCGCCTACGA TTTCACGACC GACCGCGGTG CGATGGCACT GAACGACTAC
GCGCGCTCGA ACGACCCCTT CACCAAGGTC GGCCGGCAGC AGATCGCTGT CGATGTCTCC
AGCGTCATCC GGGCGTCGCC CGACAGCTTC CGCGTCGCCT GGGTCGAGCG CCGCTACGAG
AACGGCCAGC TCGCCGAGAC GACCCGCTGG ACCGCCATCC TCACCATCGT CATGCAGGTG
CCCCGCAATG CCGACCGGCT GCGCGCCAAC CCGCTCGGCA TCTACGTCAA CGCCATCAAC
TGGTCACGGG AGCTTGGGCA ATGA
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| Protein sequence | MFRRPSVHYG KTPEPETPYQ RAAQVWDERI GAARVQAKNW RFMAFGSLIL SAGFAAALVW
QSARGTIVPW VVQVDRLGQA QAVAPAVADY RPTDPQIAFH LARFIEQVRS IPSDAIIVRQ
NWLRAYDFTT DRGAMALNDY ARSNDPFTKV GRQQIAVDVS SVIRASPDSF RVAWVERRYE
NGQLAETTRW TAILTIVMQV PRNADRLRAN PLGIYVNAIN WSRELGQ
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