Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2876 |
Symbol | |
ID | 5422124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3201320 |
End bp | 3203308 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640882130 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_001417772 |
Protein GI | 154246814 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.333866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCA CGAAGATTCT CTGGGGACAG ATTCTCGCCG TCTTCGTGAT CGTGCTGACC ACGACCTGGA CCGCGACCCA GTGGACGGCA TGGCAGCTAG GCTTCCAGCC GCAACTCGGC CGGCCATGGT TCGAGGCATT TGGCTGGCCA GTCTACCATC CGCCGGCCTT CTTCTGGTGG TGGTACTTCT ACGACGCCTA TGCGCCTTCG GTTTTCGTCG AGGGCGCCTA CATCGCCGCA TCCGGCGGCT TCATTGCCAT CGCGGTCGCC ATCGGCATGT CAGTGTGGCG AGCCCGCGAG GCCAAAAATG TCGAAACCTA TGGTTCGGCG CGCTGGGCGC GAGCCGACGA GGTGCGCGCC GCCGGCCTGC TTGGGCCCGA TGGCGTGGTG CTCGGCAGGT TCGATCGCGC CTATCTTCGC CATGACGGGC CAGAGCATGT GCTGTGCTTC GCGCCGACCC GCTCCGGCAA GGGCGTCGGC CTGGTCGTGC CCTCGCTGCT GACCTGGCCG GGCTCCGCCA TCGTTCACGA CATCAAGGGC GAGAACTGGC AGCTCACTTC CGGCTTCCGC GCCCAACATG GCCGCGTGCT GCTGTTCGAT CCCACGAATG CGAAGTCGTC CGCTTACAAC CCGCTGCTCG AAGTCCGCCG CGGCGAATGG GAGGTCCGCG ACGTCCAGAA CATCGCCGAC ATCCTGGTCG ATCCCGAAGG GAGTTTGGAA CGCCGCAATC ATTGGGAGAA GACGTCCCAC GCACTCCTCG TCGGCGCTAT CCTGCACGTT CTCTACGCTG AGACCGACAA GACACTCGCA GGCGTCGCCG CCTTCCTCTC CGACCCCAAG CGGCCGATCG AGTCGACGCT CGCCGCCATG ATGAAGACGG CGCATCTCGG CGAAGCTGGA CCGCACCCGG TCATCGCATC GGCCGCGCGC GAGCTGCTGA ATAAGTCCGA CAATGAGCGG TCGGGCGTCT TGTCGACCGC GATGTCGTTT CTCGGACTCT ATCGCGATCC CGTGGTGGCG GATGTTACGC GCCGTTGCGA CTGGCGCATC ACAGACATTG TTGGCGGAGC GCGACCGTCG ACGCTCTACC TCGTCGTGCC GCCATCTGAC ATCGCGCGCA CCAAGCCGCT GATCCGGCTT ATCCTCAATC AGATCGGACG CCGACTGACG GAGGATCTCA ACGCCAAAGG CAGGCGGCAC CGGCTGCTGC TCATGCTCGA CGAGTTTCCC GCACTCGGGC GCCTCGACTT CTTCGAGAGC GCCTTGGCGT TCATGGCGGG CTATGGGCTG AAGAGCTTCC TGATCGCCCA GTCGCTCAAT CAGATTGAGA AAGCGTATGG TCCGAACAAC TCGATCCTCG ACAACTGCCA TGTGCGCGTG AGCTTCGCGA CCAATGACGA GCGCACGGCC AAACGCGTCT CCGACGCCCT CGGCACCGCG ACCGAGATGC GGGCAATGCG AAACTACGCG GGGCACAGGC TGAGCCCATG GCTCGGCCAT CTGATGGTTT CGCGATCGGA GACGGCGCGC CCACTGCTGA CGCCGGGTGA GGTGATGCAG CTCCCGCCCG CCGACGAGAT CGTGATGGTG GCCGGTACGC CGCCGATACG CGCGAAGAAA GCCCGCTATT TCGAGGATCG CCGGTTTCAG GAACGCGTCC TGCCACCACC CGCGCTCGCG AGGCCAGCCG CGGGAAAGCC GGACGATTGG AGCGCCCTGC CATTGCCGTC GCGGCCGCAA CCCGATGCAG CCGCGCAGCA GGACGGCACC GGCGATGACG ACTCGACCGG CTCCGAACGG CGTCAGCAAC CGGAGCTGAC CGCGGTAAAG CCTGTCGAGA GGAAGGCGCC GATCGACAAC GAGTTCGAGC TCGATGGTCC CGACGACGCC GATGACGACG ACGCCGCGCG CGCAGGCCGG CTGAATCAGG TGATGCAGGG CGTCGCGCGG CAGGTCTCGC TCGATCCCAG TGACGGGATG GACCTCTGA
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Protein sequence | MSATKILWGQ ILAVFVIVLT TTWTATQWTA WQLGFQPQLG RPWFEAFGWP VYHPPAFFWW WYFYDAYAPS VFVEGAYIAA SGGFIAIAVA IGMSVWRARE AKNVETYGSA RWARADEVRA AGLLGPDGVV LGRFDRAYLR HDGPEHVLCF APTRSGKGVG LVVPSLLTWP GSAIVHDIKG ENWQLTSGFR AQHGRVLLFD PTNAKSSAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE RRNHWEKTSH ALLVGAILHV LYAETDKTLA GVAAFLSDPK RPIESTLAAM MKTAHLGEAG PHPVIASAAR ELLNKSDNER SGVLSTAMSF LGLYRDPVVA DVTRRCDWRI TDIVGGARPS TLYLVVPPSD IARTKPLIRL ILNQIGRRLT EDLNAKGRRH RLLLMLDEFP ALGRLDFFES ALAFMAGYGL KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFATNDERTA KRVSDALGTA TEMRAMRNYA GHRLSPWLGH LMVSRSETAR PLLTPGEVMQ LPPADEIVMV AGTPPIRAKK ARYFEDRRFQ ERVLPPPALA RPAAGKPDDW SALPLPSRPQ PDAAAQQDGT GDDDSTGSER RQQPELTAVK PVERKAPIDN EFELDGPDDA DDDDAARAGR LNQVMQGVAR QVSLDPSDGM DL
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