| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2778 |
|---|
| Symbol | |
|---|
| ID | 5425326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3075494 |
|---|
| End bp | 3076456 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640882031 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001417675 |
|---|
| Protein GI | 154246717 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAAAT CGCAAGTTCG AGACACGACA GTCCGACCCA CGGCCCGCGA CGCAGCGCTC
GGCTGGTTCG TCAAGATGCG CTCCGGCGAG GCAACGCCAG CGGAGGTCGC CGATTTCCAG
CAATGGATCG CCGCTGCCGC CGATAACCGC CGGGAATATG ATGCGTTGGA GGCGCTCTGG
GGCGACCTCG ACCAGGTGGG CGATCCACGC CGTGTCGCGG CGTCCGTCCC GGCATCGCGC
CCCATGATGT CGCGGCGCGG CCTGTTCCTT GGGGCGGCGG GCGTCGCGGC GGCGGTGGTG
GCGGGCGTGG CGCTGGGCGT GCCGGACTGG TTCGATGGTG CCATCCGCAC CGGCGTCGGC
GAGCAACGTC AGCTGACCCT CGCGGACGGC TCGCGGGTGG TGCTCGATGC CGATTCCGCC
CTGTCGCTCC AGTTCACGCC GCAGGCGCGC CGGCTCACCT TGCAGCGCGG CCGCGCCTTC
TTCGATGTGG CGCCCGATCC GGCGCGGGCG TTCTCAGTGA CGGCTGCGGG CGGGGTCACC
ACGGCCACCG GCACCCAGTT CTCCGTGCAC CTGTGGTCGA ACGAAGTGAC TGTGGCGGTC
AGCGAGAGCG CAGTGTCGAT CCGCGCCGGC GCTGCCGCGC TGTCCCGGCT CAAGGCGGGG
GAGGCGGTGA GCTATGATGC CTCCGGCATC GGCGAAACCG AACAGGTGAG CGATGCCCAG
GCCTCGGCTT GGCGGCGCGG CAAGCTGATC TTCGAGGATC GCCCGCTTCG TCAGGTGATC
GCGGACGTCA ACCGCTACCG GCCCGGCACC ATCATGGTCA CCGACAGCAC CCTGCTGCGG
CTGCGGGTTT CCGGCATTTT CGACATCCGT CAGCCGGACG GCGTTCTGGA GGCCATCACT
CGCAGCCTGC CGGTGCGCTC CATGGCGCTC ACCCGCTATC TCGTGCTGCT TTACCCCGCC
TGA
|
|---|
| Protein sequence | MRKSQVRDTT VRPTARDAAL GWFVKMRSGE ATPAEVADFQ QWIAAAADNR REYDALEALW
GDLDQVGDPR RVAASVPASR PMMSRRGLFL GAAGVAAAVV AGVALGVPDW FDGAIRTGVG
EQRQLTLADG SRVVLDADSA LSLQFTPQAR RLTLQRGRAF FDVAPDPARA FSVTAAGGVT
TATGTQFSVH LWSNEVTVAV SESAVSIRAG AAALSRLKAG EAVSYDASGI GETEQVSDAQ
ASAWRRGKLI FEDRPLRQVI ADVNRYRPGT IMVTDSTLLR LRVSGIFDIR QPDGVLEAIT
RSLPVRSMAL TRYLVLLYPA
|
|---|
| |