| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2777 |
|---|
| Symbol | |
|---|
| ID | 5425386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3074797 |
|---|
| End bp | 3075312 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640882030 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001417674 |
|---|
| Protein GI | 154246716 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.933443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCCGA AAAGTAGAAT ATTTCTATTA AACGCCTTCG CGCGGCATTA CGACGAATTG
CTGCGTCATG TCGCGCGTCG GATCGGCAAT CCGGCTGCGG CGAACGACGT GGTTCAGGAC
ACTTTCCTGC GGGTTCATGC CTGCGCGCCC ACCGCCGAGA TTGCCAGCCC GGCGGCCTAT
CTCTTTCGCG TCGCCGATAA CATCGCCATC GACCATCTGC GCCATGAAGC CGTGCGCTCG
CGGGTGGTTT CGGCGGACAC CGAATGTGAG GGCGTCGCTG CGCCCGACCC CTCTCCCGAG
CATGCCCTCG ACTACAAGCA GCGCCTGCGG GCGCTGGACG CCGCCGTCGC CGAGCTTCCG
CCGAAGTGCC GCGAGGTGTT CCTGCTGCAT AAGTTCGATG GCCTGAGCCA TGGCGAGATC
GCCGAGCGCC TCGGCATCAG TCGCAGCATG GTGGAGAAGC ATGTGATGAA GGCGCTGGTC
CACTGCCGCG ACCGGCTGGC GGACCTGCTC GATTAG
|
|---|
| Protein sequence | MEPKSRIFLL NAFARHYDEL LRHVARRIGN PAAANDVVQD TFLRVHACAP TAEIASPAAY
LFRVADNIAI DHLRHEAVRS RVVSADTECE GVAAPDPSPE HALDYKQRLR ALDAAVAELP
PKCREVFLLH KFDGLSHGEI AERLGISRSM VEKHVMKALV HCRDRLADLL D
|
|---|
| |