Gene Xaut_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2718 
Symbol 
ID5421829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3012512 
End bp3013741 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID640881971 
Productmajor facilitator transporter 
Protein accessionYP_001417615 
Protein GI154246657 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.377036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCGT CATGCGATCT CTTCGGCGCG GGCTCTAAGG ACATCGCCAT GCCCCTTGCG 
CTCTATGCCC TCACCATCGC CGCCTATGCC ATCGGCACCA CGGAATTCGT CATCGTCGGG
CTGTTGCCGA CAGTGGCCAC CGACCTCGGC ATCACCCTGC CCATCGCCGG GCTGATCGTC
AGCGTCTATG CGCTGGGCGT CACCTTCGGC GCGCCGGTGC TGACCGCGCT CACCGGCGGC
ATGGCGCGCA AGCCGCTGCT GCTCGGCCTG ATGGCCCTGT TCATCGCCGG CAATACCGCG
GCCGCGCTCA GCCCCACCTA TGAATGGCTG CTGGTGGCGC GGGTGCTCTC CGCCTTCGCC
CACGGCGTGT TCTTCTCGGT GGGCGCCACC ATCGCCGCCG ATCTGGTGCC GGAGAACCGC
CGCGCCTCGG CCATCGCCCT CATGTTCATG GGGCTGACGG TGGCCATCGT CACCGGCGTG
CCGCTCGGCA CCTTCATCGG CCAGAGCTTC GGCTGGCGCG CCACCTTCTG GGGCGTGGCG
CTGCTGGGCA TCATCGCTTT TGCCGCCATC GCCCTGCTGC TGCCGTCCAA CATCCGCAAG
GCGCCCGCCG CCTCCCTGCT CGATCAGGTG CGGGTGCTGG GCTCCGGCCG GCTGCTGCTG
GTGTTCGGCA TGACCGCGCT CGGCTATGGC GGCACCTTCG TGGCCTTCAC CTATCTGGCC
GCCATCCTGG AGACCGTCAC CGGCTTCGCC GCGGCGCAGG TGAGCCTCAT CCTCATTCTC
TACGGCCTTG CCATCGCGGT GGGGAACCTC TCCGGCGGGC GCATCGCCGA CCGCGATCCG
GTGAGGGCGC TGACCATCCT GTTCACGCTT CAGGCGCTGG TGCTGGTGGC CTTCTTCTTC
ACCGCGCCAT CTCCGGTGCT TACGCTGGTG ACGCTGGCGG CGCTCGGCTT CCTGTCGTTC
GCCAATGTGC CGGGGCTGCA GATCTATGTG GTGGAGCTGG CGAAGCGCTA TCGTCCGGGG
GCGGTGGATA CCGCGTCCGC CCTCAACATC GCGGCGTTCA ACCTGGGCAT TGCGCTTGGG
GCCTGGATCG GCGGGCTGGC GGTATCCTCA AAGCTGGGCC TCGGCGCCAC GCCGGTGGTG
GGCGCCCTCA TGGTGGCCGG AGCGCTGGGG CTGACGGTTT GGAGCGCCGC ATTGGACAAC
CGCGCCCGCG CTGTCGCCTG CCCCGTCTGA
 
Protein sequence
MRSSCDLFGA GSKDIAMPLA LYALTIAAYA IGTTEFVIVG LLPTVATDLG ITLPIAGLIV 
SVYALGVTFG APVLTALTGG MARKPLLLGL MALFIAGNTA AALSPTYEWL LVARVLSAFA
HGVFFSVGAT IAADLVPENR RASAIALMFM GLTVAIVTGV PLGTFIGQSF GWRATFWGVA
LLGIIAFAAI ALLLPSNIRK APAASLLDQV RVLGSGRLLL VFGMTALGYG GTFVAFTYLA
AILETVTGFA AAQVSLILIL YGLAIAVGNL SGGRIADRDP VRALTILFTL QALVLVAFFF
TAPSPVLTLV TLAALGFLSF ANVPGLQIYV VELAKRYRPG AVDTASALNI AAFNLGIALG
AWIGGLAVSS KLGLGATPVV GALMVAGALG LTVWSAALDN RARAVACPV