| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2690 |
|---|
| Symbol | |
|---|
| ID | 5423400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 2978640 |
|---|
| End bp | 2980007 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640881944 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001417588 |
|---|
| Protein GI | 154246630 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.12833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CAGCGGAGCG GACGATCGAC GTCCGCCGGT TTCTTGATGA ACAGCCCATC
TCCGGCTTCC AGTGGCTGAT CTTCGCCCTG TGCTTCGCGA TCGTCCTGCT GGATGGCTTC
GATACTGCCG CCATCGGCTA TATCGCCCCC TCGCTCCTGG GCGAATGGAA CATCGCCAAG
GCGGATCTGG CCCCGGTGCT CAGCGCCGCC CTGTTCGGCC TCGCCGGCGG GGCCTTGTGC
TCCGGGCCCC TGGCCGACCG CTTCGGCCGC AAGCTGGTGC TGCTCGCGGC TGCGGGCGTG
ATGGGCGTCG CCAGCCTCGT GGCCGCCACC GCAGGCAGCC TCGATGCGCT GGTGATCTGG
CGTTTCGTCA CCGGTCTCGG CCTCGGCGCC GCCATGCCGA ATGCCGTGAC GCTGGTGAGC
GAATACTGTC CGGCCAAGCG CCGTGCACTC GTCACCAATG CCATGTTCTG TGGCTTCCCC
CTGGGCGCGG CGGCCGGCGG CTTCGTCGCA GCCTGGATGA TCCCGCACTT CGGCTGGCGC
AGCGTGCTGG ACCTCGGCGG CATCGCCCCG CTTCTGCTCG TGGCGGTGAT GATTGTCCTG
CTCCCGGAAT CGGTCCGTCA CCTTGCCCAG CATGGTGCCC CGGCGGAGAA GATCGGCCGC
ATTCTCCGGC GCATTTCCGC TGCCGCGAAG GGGGCGACCC GTTTCGTGCT CAATGAAGGC
GAGGGCGCTG CGGAAGCCGG CCGGCGCGGC ATCACCGTGG TGTTTTCCGC GCCCTATATC
CTCGGCACGC TGTGCCTGTG GGTCGCCTAT TTCATGGGCC TGGTCATCTT TTACGGCCTC
ATCAACTGGA TGCCGATCAT CCTGCGCGAC AGCGGCATCA GTCCCACCCA GGCGACACTC
ATTTCGGCCC TGTTCCCGCT TGGTGGCCTC GGCGCCATCC TGGCCGGCTG GCTCATGGAT
CGCTTCCATG CCGATCTGGT GGTGGCCGCC GGCTTCCTGC TCACGGCGCT GGCGGTCTAT
GCCATCGGCC AGGTGGTGGG CCAGGTCGGC CCGCTCACGG CGGCGGTCTT CATTGCCGGA
ACCGTCATGA ACACCGCGCA ATCCTCTCTG CCCGCGTTGG CCGCCATGTT CTATCCGACC
CGGGGCCGGG CCACCGGGGT GGCCTGGATG CTCGGCATCG GCCGGTTCGG CGGCATTGCC
GGCTCGTTCC TGGTGGCCGA GCTCGGGCGG CGGCAGCTCG GCACCGCGGC GGTGTTCCTG
GTGATGGCGG GACCTGCCCT GATCGCCACC CTCGCCATCC TCACCAAGGC GTGGCTGGGC
CCCAAGCCTG ATGCCTCGGC CGGCCCGGTG CCCTCGCTCG GCCACTGA
|
|---|
| Protein sequence | MTTPAERTID VRRFLDEQPI SGFQWLIFAL CFAIVLLDGF DTAAIGYIAP SLLGEWNIAK
ADLAPVLSAA LFGLAGGALC SGPLADRFGR KLVLLAAAGV MGVASLVAAT AGSLDALVIW
RFVTGLGLGA AMPNAVTLVS EYCPAKRRAL VTNAMFCGFP LGAAAGGFVA AWMIPHFGWR
SVLDLGGIAP LLLVAVMIVL LPESVRHLAQ HGAPAEKIGR ILRRISAAAK GATRFVLNEG
EGAAEAGRRG ITVVFSAPYI LGTLCLWVAY FMGLVIFYGL INWMPIILRD SGISPTQATL
ISALFPLGGL GAILAGWLMD RFHADLVVAA GFLLTALAVY AIGQVVGQVG PLTAAVFIAG
TVMNTAQSSL PALAAMFYPT RGRATGVAWM LGIGRFGGIA GSFLVAELGR RQLGTAAVFL
VMAGPALIAT LAILTKAWLG PKPDASAGPV PSLGH
|
|---|
| |