Gene Xaut_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2593 
Symbol 
ID5421848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2882456 
End bp2883754 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content71% 
IMG OID640881847 
Productcell wall hydrolase SleB 
Protein accessionYP_001417492 
Protein GI154246534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTC GCCGAGACCG AGGGACACGC ATCAGGCGGT TCGCTTCGCC TGTCCTGCTT 
GCCGCCGCTT TCGCCGCCGT GCCGCCCGCA ATCGCCGGGG CGGATGGCGC CGATTACCGT
TCATCCGCCA ATGGGCTCGT CATGCTGGCC GCGCCGGCGC GGGCGCTCAA GGTCAGCACG
CTGGACCTGC CCCAGCCCAT CGGCACCGGC CTGCCCGAGC CGCGGGCGGC ATTCAACGAC
GCCCCGCGGG TGATCCGGCC CGGGGCGCCC ATCGTCACCG CCTCGCTTAC CGATGTGTCG
GTTCCGCCTG AGGCCTTCAG GGCCGCCGCC ATCGCCGGCG CGCCGGTGGC AGATGACCTG
ACCCCGTCGC CCGCCGTTGC AATGGCCTCG GCATCGGACG ACGACGCCTT CGCCTATCCC
CCGCCGCTGG TTCTCGACGC CGAGGATGTG CCCGTCCGCA CCGGGCCGAG CCAGCCCCAC
CTCGAACTCG CCCTCGATCT GCTGCTGGAA CTGCCGCTGA TCCAGGACAA TTCCGGCCCC
ATCGCCGAGG ATGCCGCCTT CGGCCCCGAT TTCGGGGCCG CGCCCGAGGC CGCATCCGCC
GGGGAGGAGC CGCCCGCCGC GCCCATCGAC CAGGCCGAGG CGCAGCCGGC GCTCCATCAC
GATCCGGTGG CGGTGTTCAG CCGCGATCCC AACGTTTTCC CGGCATTGGC GTTCGAATAT
CACGCCCTGG CCGAGCAGGG CTTCGTGCCG CTGCCCGCGC CGCGCCCCAC CGGCGCGGCT
GAGATCGCCA CCAGCGCTGG CGCCGAGGCG GTGGAAGCGG CCGAGGATGG CGAGCGCGAC
GGCATCTGGC CCTCGCCTGC GCAGCGCCTC AGCCTGGCCG GCGAGCAACT GGCGCGGGCC
CAGAAGTGCC TGGCGGAAGC CATCTATTTC GAAAGCCGGG GCGAGCCGAA GCGGGGGCAG
GTGGCGGTGG CGCAGGTCAT CGTCAACCGG GTGTTCTCCG GCTACTACCC CAATGATGTG
TGCGGCACCG TCTACCAGAA CGCCCACCGG CACCTGGCCT GCCAGTTCAC CTTCGCCTGC
GACGATGTGC GCGACGTGGT GCGCGAGCCG GACATGTGGG TGCAGGCCAA GGACATCGCC
GCCGATATGC TGGACGGCAA ATTGTGGCTC ACCAGCGTGG GCCGGGCCAC CCACTACCAT
GCCTATTGGG TGCACCCGAG CTGGGTGAAG GAGATGCGCA AGCTCGACCG CATCGGCGTA
CACACCTTCT ATCGCCCCCG CCGCTGGGGC GAGGGCTGA
 
Protein sequence
MEFRRDRGTR IRRFASPVLL AAAFAAVPPA IAGADGADYR SSANGLVMLA APARALKVST 
LDLPQPIGTG LPEPRAAFND APRVIRPGAP IVTASLTDVS VPPEAFRAAA IAGAPVADDL
TPSPAVAMAS ASDDDAFAYP PPLVLDAEDV PVRTGPSQPH LELALDLLLE LPLIQDNSGP
IAEDAAFGPD FGAAPEAASA GEEPPAAPID QAEAQPALHH DPVAVFSRDP NVFPALAFEY
HALAEQGFVP LPAPRPTGAA EIATSAGAEA VEAAEDGERD GIWPSPAQRL SLAGEQLARA
QKCLAEAIYF ESRGEPKRGQ VAVAQVIVNR VFSGYYPNDV CGTVYQNAHR HLACQFTFAC
DDVRDVVREP DMWVQAKDIA ADMLDGKLWL TSVGRATHYH AYWVHPSWVK EMRKLDRIGV
HTFYRPRRWG EG