Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_2542 |
Symbol | |
ID | 5421540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 2837464 |
End bp | 2838270 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640881796 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001417441 |
Protein GI | 154246483 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA CACCAGCCGC CCGCGCGTCC GCGCCGGCCG GCCAATCGTT CGAGTATCGC CTCCAGCGCA CCCCCGTAGG CGTGGTGCTG CTCGATGCCG ATCTCACCAT CCGCTCGGTG AACCCGGTGG CCATGCGCCT CCTGGCCCCG CCGGGGCAGA GACTGGCGGG CGTGGACATC CTCTCCCTCC ACCCCGACGA GGCGCGGGAG AAGGTCGCCT TCCTCATCGA GCGGGCGCGG ACCTCGGCGG ACGGCACCTC GTCGCTGGTG GTCACCACGG CCATGGGCAG CCTGATTGCC AAGATCAGCC GGCTGGAGGA GACCCCGGAC GGACCGGTGG AAGGCTTCTG CATGATGATC CATGCGCTCG CGGAAGCCCC GGTGATGGGA CGCTCGCAGG CGGACGATGC CGACGTTCAG GTGGACGGCC TCTCAGTCGC CGGGGAAGCG GCCATGAAGG CCCTGTGCCC GCTCATGAAG CTGCCGCTGG TGCAGGGCAA GGGCGACCTC ATCAGCCTCA TCGATGTCAA CGAGGTGGTG TGCCTGGTGG CCCAGGGGCA TTATGCGGAG GCGCGCACCC TCGGCTTCTC CGCCTTCTGC CCGCGCCCGC TGGCGGACCT GGAGCGGCGG CTGGATCCGG CGCTGTTCGT GCGCGTCCAT CGGCGCTACC TGGTCAACAT CCGCCATGTG CGCGCCGCCA CCCGCGAGGA CGGCGCCTGG CACCTGGTGA TGGCCGACAC CGCCCGGACC CGCGTGCCGG TGAGCCGCGG CAAGGTGGAG GCAATCCGCC GGCTTCTGGC GGTTTGA
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Protein sequence | MADTPAARAS APAGQSFEYR LQRTPVGVVL LDADLTIRSV NPVAMRLLAP PGQRLAGVDI LSLHPDEARE KVAFLIERAR TSADGTSSLV VTTAMGSLIA KISRLEETPD GPVEGFCMMI HALAEAPVMG RSQADDADVQ VDGLSVAGEA AMKALCPLMK LPLVQGKGDL ISLIDVNEVV CLVAQGHYAE ARTLGFSAFC PRPLADLERR LDPALFVRVH RRYLVNIRHV RAATREDGAW HLVMADTART RVPVSRGKVE AIRRLLAV
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