Gene Xaut_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2428 
Symbol 
ID5423300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2713041 
End bp2715878 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content70% 
IMG OID640881681 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001417327 
Protein GI154246369 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.396366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCG CGCCCATAGT GGTGGGCGCG GCGGTGGTCT ACCTCGCGCT CCTGTTCGCC 
GTCGCCGCCT TCGCCGACGC CCGCGCGCGC GCCGGCCGCT CGATCATCGG CAACGCCTGG
ATCTATGCCC TGTCGCTGGC GGTCTATTGC ACTGCCTGGA CCTATTTCGG CAGCGTCGGG
CGCGCCGCCG CCACCGGCGT TTGGTTCCTG CCCATCTATC TTGGCCCCAT GCTGGCCATG
CTTCTGGCGT GGATCGTGGT GCGCAAGATG ATCCGCATCG CCCACACCTA CCGCATCACC
TCCATCGCCG ATTTCATCGC CAGCCGCTAT GGCAAGAGCC CGCTGGTGGC GGCGCTGGTC
ACCCTCATCA CCGTGGTGGG CATCGTGCCC TACATCGCGC TCCAGCTAAA GGCGGTGTCG
GCCGGCTACC AGTTGCTCAC CGCCTCCGGG ACCGCCGGCA GCGGAACGAG CCCGGCCTGG
TGGCAGGACG GCACGCTTCT GGTGACGCTG GCCCTCGCCC TGTTCACCAT CCTGTTCGGC
GCCCGCCACC TCGACAGCGC CGAGCGGCAC GAGGGCATGG TGGCGGCGGT GGCGTTCGAA
TCCCTCGTGA AGCTCGTGGC CTTCCTCGCG GTGGGGGTGT TCGTCACCTA CGGCCTGTTC
AATGGCATGG CTGACATCTG GGCGCGGGCC AGGGCGGTGC CGGAGCTGGC CTCCCTGCTG
CGCCTTGGCG GCACGGGCGG GGCTGGCGCC TTCGGCTATG CCCAGTGGTT CACGCTGACG
CTGCTCTCCA TGCTCTCGGT GCTGCTGCTG CCCCGCCAGT TCCAGATGAT GGTGGTGGAG
TGCGTGAACG AGCCCCACCT GAAGCGCGCC GCCTGGGTGT TTCCCGCCTA TCTCCTCGTC
ATCAACATCT TCGTTCTGCC GCTGGCGCTG GGCGGCCTGC TGCTGGGCCC GAACGGCGCG
GATCCGGAGA CCTTCGTGCT GTCGCTGCCG CTGGCGAACG GGGCCACGGG GCTGGCGCTG
TTCGCCTATG TGGGCGGGCT CTCCGCCGCC ACCGGCATGC TGATCGTGGA GACCATCGCC
GTCTCCACCA TGGTCTGCAA CGATCTCGTC ATGCCGGCCC TGCTGCGGCG CAGGGATTTC
GGCGCCCGGG CCGGCGGCGA CCTCACGGCG CTGATCCTCA ACATCCGCCG CGCCGCCATC
CTCGCCATCC TGCTGCTGGG CTACCTCTAT TTCCAGGTGG CGGGGGAGGC CTATGCGCTG
GTCTCCATCG GCCTCATCAG CTTTGCCGCC GTGGCCCAGT TCGCCCCCGC ATTATTCGGC
GGCATGTACT GGCGCGAGGC CACCCGCGCC GGGGCGCTGG GCGGCCTTTG CGGCGGCTTC
CTGGTGTGGG CCTACACCCT GATGGCGCCC TCGGTGGCGA AATCGGGATG GATCGACGAC
GGCTTCCTCA TCCACGGCCC GTTCGGCATC ACCGCCCTCG CCCCGGAGCG CCTGTTCGGC
CTTCAGGGCC TCGATAATCT CTCCCATTCC CTGTTCTGGA GCCTGCTGGT CAACGTCGCC
CTCTATGTGG GCCTGTCCCT GTGGCGCGCG CCCTCGGGGC GGGAAGCGAG CCAGGCGCTC
TTGTTCGTGG ACGTGTTCGC CCGCGGCCAT GCCACGGCCG CCGCGGGCGC CGCCGACCCG
GTGTTCTGGC GCGGCCGCGC CCGCCCCGCC GACCTGATGG CGCTGGCAAG CCGCCTGCTT
GGCCCCGACG CCGCGCGTCA GATCTTCACC GAGCACGCCC ACGAGAGCGG CGTCGCCGTG
GGCACCGACC TCACCGCCGA CGCCCGGCTG GTGGACAAGG TTGAGCGGCG CCTCGCCGGC
GCCGTGGGCA GCGCCTCGGC GCGGGTGCTG GTGGCGGCGG TGGCGGAGGA GGAGCCGCTG
AGCCCCGCCG ATGTCATGGA GATCCTGAAC GAGGCCTCGC AACTGCGCGT GTATGCGCTG
GCGCTGGAGG AGAAATCCCG CTCCCTGGAG ATCGCCTCGG CGGAACTGTC CGCCGCCAAC
GCCCAGTTGC GCACTCTGGA CGAGCTGAAG GACGATTTCG TCTCCTCCGT CACCCACGAA
TTGCGCACCC CGCTCACCGC CATCCGCGCC CTGTCGGAGC TGATGCTGGA CGCCCCGGAC
ATGGAGGAGG CCCAGCGCCA GGAGTTCCTC GCCATCATCG TGGGCGAGAG CGAGCGGCTG
GGCCGGCTCG TCAACCAGGT GCTGGACATG GCCAAGCTCG AATCCGGCCA TGGCGAATGG
CACAATGCCG ACGTGGACCT GCGCCGCCTC GTGCGCGACG CCGTCACCGC CACCACCGAG
CTGGCCCGCA GCCGGGGGGC GGAAATCGTG TTCGAGGCGC CGGAGACGGT GCCACTGCTG
CGCGCCGACC CCGACCGGCT GACGCAGGTG GTGCTGAACC TCATCTCCAA TGCGGTTAAA
TTCGTCCCGG CCGAGGGCGG GCGCGTCCAC GTCAGCCTTC ATGTGGAGGG CGACGGCCTC
GTCGTTCGGG TGAAAGACAA TGGCCCGGGG GTGCCAGAGG CCGAGCGCGA CACCATATTC
GAGAAGTTCC GTCAGGGCGG TGACGCCCTG ACCCGCCCCC CCGGCACCGG GCTGGGGCTT
CCGATCAGCC GCCGGATCGT GGATCATTTC GGCGGCAGGA TGTGGCTGGA GAACCAAGAC
GGCAGCGGCG CGTGCTTCGC GTTCCGACTG CCCTTCCAGC CAGATGCCGG AGCGGAAGGG
CCTCGCCCTG CCGCATCCGA ACCCGCAGGC AAGGTGAAAG CCCTGGCCGG CGGCAACACG
AGGGAGGAAA CGCCATGA
 
Protein sequence
MISAPIVVGA AVVYLALLFA VAAFADARAR AGRSIIGNAW IYALSLAVYC TAWTYFGSVG 
RAAATGVWFL PIYLGPMLAM LLAWIVVRKM IRIAHTYRIT SIADFIASRY GKSPLVAALV
TLITVVGIVP YIALQLKAVS AGYQLLTASG TAGSGTSPAW WQDGTLLVTL ALALFTILFG
ARHLDSAERH EGMVAAVAFE SLVKLVAFLA VGVFVTYGLF NGMADIWARA RAVPELASLL
RLGGTGGAGA FGYAQWFTLT LLSMLSVLLL PRQFQMMVVE CVNEPHLKRA AWVFPAYLLV
INIFVLPLAL GGLLLGPNGA DPETFVLSLP LANGATGLAL FAYVGGLSAA TGMLIVETIA
VSTMVCNDLV MPALLRRRDF GARAGGDLTA LILNIRRAAI LAILLLGYLY FQVAGEAYAL
VSIGLISFAA VAQFAPALFG GMYWREATRA GALGGLCGGF LVWAYTLMAP SVAKSGWIDD
GFLIHGPFGI TALAPERLFG LQGLDNLSHS LFWSLLVNVA LYVGLSLWRA PSGREASQAL
LFVDVFARGH ATAAAGAADP VFWRGRARPA DLMALASRLL GPDAARQIFT EHAHESGVAV
GTDLTADARL VDKVERRLAG AVGSASARVL VAAVAEEEPL SPADVMEILN EASQLRVYAL
ALEEKSRSLE IASAELSAAN AQLRTLDELK DDFVSSVTHE LRTPLTAIRA LSELMLDAPD
MEEAQRQEFL AIIVGESERL GRLVNQVLDM AKLESGHGEW HNADVDLRRL VRDAVTATTE
LARSRGAEIV FEAPETVPLL RADPDRLTQV VLNLISNAVK FVPAEGGRVH VSLHVEGDGL
VVRVKDNGPG VPEAERDTIF EKFRQGGDAL TRPPGTGLGL PISRRIVDHF GGRMWLENQD
GSGACFAFRL PFQPDAGAEG PRPAASEPAG KVKALAGGNT REETP