| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2375 |
|---|
| Symbol | |
|---|
| ID | 5422866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2651788 |
|---|
| End bp | 2653311 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640881629 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001417275 |
|---|
| Protein GI | 154246317 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.656731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA CCGGCCCCGA CACCCCCAAC TCCGGCGCCC TGTCGCCCCG CGCCCCGCGC
CAGGCCGGAC ATGCGCGCAT GGAGGCCCTC GCGCGCCTGC CGGTGTTCTT TGGCCTGGAG
GGCCGGCGCG TGCTGGTGGC GGGCGGCGGC GAGCCGGCGG CCTGGAAGGC GGAACTGCTC
TCCGCCGCCG GGGCGCGGGT GGAGGTGATC GCCCCCCATG TCTGCGAGGA CCTGTGGCGG
CTGGCCGGCG CGCCGCCCCG TGGACCCATC TCGATCCATG TGCGCGACTG GCACGCCGAC
GACATCCCCG GCGCCGTCCT CGCGGTGGCC GGCTTTGACG AAGAGGCGGA CGCCCTCAAC
TTCACCACCG CCGCCCGCGC TGCCGGCGTG CCGGTGAACG CCATCGACAA GCCGGCCCTC
TCCGACTTCA CCTTCGGCGC CATCGTGAAC CGCTCGCCGC TGGTGGTGGG CATCTCCACC
GACGGCGCGG CGCCCGTCTT CGGGCAGGCG GTGCGGGCCA AGATCGAGGC GCTGTTGCCC
TCGGGCTTCA AGGCCTGGGC GCTGGCCGCA AAGACGTGGC GGCAGGCGGT GACCGCGCGC
GGCCTCTCCC ACCACGCCCG CCGCGCCTTC TGGGAACGCT TCGCCGCCAC GGCGCTGGCC
GAGCCCAACC GGGCGCCGCA GGACACCGAC CGCGCCGCCC TGTTCACCGC CATCGAGGCG
GAGGGCACGC CGCACCGCTC CGGCCACGCG GGCTCGGTGG TGCTGGTGGG CGCAGGCCCC
GGCGATCCGG AGCTGCTCAC GCTCAAGGCG GTGCGGGCGC TGCAATCGGC GGACGTGGTG
CTCTATGACG ACCTCGTCTC CGGCGCGATC CTCGATTTCG CCCGGCGCGA GGCGAAGAAG
ATGCTGGTGG GCAAGACCGG CTACGGCCCC TCCTGCAAGC AGGACGACAT CAACGCTTTG
ATGGTGGACC TCGCCAAGGA AGGCCGCCGC GTGGTGCGCC TGAAGGGCGG CGAGCCCATG
ATCTTCGGCC GCGCCGGGGA AGAGATCACC CATTGCCATG CGGCGGGGGT GCCGGTGGAG
GTGATCCCCG GCATCTCGGC ACCGCAGGGG GCGGCGAGCC GGCTGGTCAC CTCGCTCACC
CACCGCGACC ATGCACGGCG GCTGCAATTC GTCACCGCCC ATGCTCGCGA CGGCAAGCTG
CCCAAGGACC TCGACTTCAA CGCGCTGGCC GACAAGGCGG CGACGACGGT GGTCTACATG
CCCCGCCGCA CCCTGCCGGA CCTGGTGCGC AACCTGATGG CCGCGGGCAT CGATCCGGCG
ACGCCCGCGG TGGCCATGTT CTCGGTGACG CGGCCGGAGG AGAAGGTGAT CCTCGCCACC
GTCGCGACGC TGGCGGAAGA GGTGGCCCGC GCCGCCGAGG TGGGCGCGCA AGGCCCCTGC
CTCATCCTCT ACGGCCAGGC CCTGGCCGAA GTGGCGGTGG ATGCCCTGCC CCAGATCGTC
CAGGCTGCCG CCAACGGCGG CTGA
|
|---|
| Protein sequence | MAATGPDTPN SGALSPRAPR QAGHARMEAL ARLPVFFGLE GRRVLVAGGG EPAAWKAELL
SAAGARVEVI APHVCEDLWR LAGAPPRGPI SIHVRDWHAD DIPGAVLAVA GFDEEADALN
FTTAARAAGV PVNAIDKPAL SDFTFGAIVN RSPLVVGIST DGAAPVFGQA VRAKIEALLP
SGFKAWALAA KTWRQAVTAR GLSHHARRAF WERFAATALA EPNRAPQDTD RAALFTAIEA
EGTPHRSGHA GSVVLVGAGP GDPELLTLKA VRALQSADVV LYDDLVSGAI LDFARREAKK
MLVGKTGYGP SCKQDDINAL MVDLAKEGRR VVRLKGGEPM IFGRAGEEIT HCHAAGVPVE
VIPGISAPQG AASRLVTSLT HRDHARRLQF VTAHARDGKL PKDLDFNALA DKAATTVVYM
PRRTLPDLVR NLMAAGIDPA TPAVAMFSVT RPEEKVILAT VATLAEEVAR AAEVGAQGPC
LILYGQALAE VAVDALPQIV QAAANGG
|
|---|
| |