| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2360 |
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| Symbol | |
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| ID | 5422827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2633071 |
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| End bp | 2636250 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640881614 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001417260 |
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| Protein GI | 154246302 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCT CACACTTCTT CATCGACCGG CCCATCTTCG CCTCGGTGGT GTCCGCCGTC
GTCATGATCC TTGGCGCGGT GACCTACCTG CGCCTGCCCG TGGCCCAGTA TCCCGACATC
GCCCCGCCGG TGATCACGGT GACCGGGCAA TATCCCGGCG CCTCGGCGGA GATCGTCGCC
GAGACCGTGG TCGCGCCCAT CGAGCAGCAG ATCAACGGCG TGGAGCACAT GCTCTACCTG
GCGTCCAACT CGACGGCGGA CGGCCGCTTC TCCATTTCCG TCACCTTCGA TATCGGCACC
AACCTCGACA TCGCCCAGGT GCAGGTGCAG AACCGCGTCG CCATCGCCCA GCCGCGCCTG
CCCAGCGAAG TGCAGCAGGT GGGCGTGGTC ACGGCCAAGT CATCGCCCGA CCTGATGCTG
GTGGTGAGCC TGTATTCGCC CGACGGCTCG CGCGATCCGC TCTTCATCTC GAACTTCGCC
AATATCGAGA TCAAGGACGT GCTCTCGCGC ATTGACGGCG TGGGCTCCAT CACCGTGTTC
GGCTCGCGCG AATACGCCAT GCAGATCTGG CTCGATCCGG ACCGGCTGTC CCAGCTCAAC
CTCACCACCA CCGACGTGGT GGCGGCGCTG AAGGCGCAGA ACGTCCAGGT GGCCTCCGGC
GTGCTCAACG CGCCGCCGGT GCCGGAGCAG CGTGCCTTCC AGATCGCCGT GCGCACCCTC
GGCCGGCTTT CGGATGCGCG GGCCTTCTCC GACATCGTCA TCAAGCAGAC CGACCAGGCG
CTGGTGCGGC TGAAGGACGT GGGCCGGGTG GAGATCGCGG CCCAGGACTA TGCCTCGACC
TCGTTCCTCG ACAAGGACAT CTCGATCCAG CTCGGCGTGT TCCAGCGCCC CGGCTCCAAC
GCCCTCGCCA CCGGCAACGC CGTGGTGGCC GAGATGGCGC GCATCGGCAA GACCTTCCCG
GAAGGGTTGA AGTACGGCAT CTACTACAAT CCCACCCAGT TCATCCAGCA GTCGGTGGAT
GCGGTGGTGC ACACCATCGG CGAGGCCATC GTGCTGGTGG TGCTGGTGGT GATCCTGTTC
CTGCAGACCT GGCGGGCGGC GATCATCCCC ATCCTCGCCA TCCCGATCTC GCTCATCGGC
ACCTTCTTCG TCATGGGCCT GTTCGGCTTC TCGCTGAACA ACCTGTCCCT GTTCGGCCTG
GTTCTGGCCA TCGGCATCGT GGTGGATGAC GCCATCGTCG TGGTGGAGAA TGTGGAGCGC
AACATCGAGG CCGGGCTCTC CCCGCGCGAT GCCGCCTACA AGACCATGGA CGAGGTGGGC
GGGGCGCTGG TGGCGATCTC GCTGGTGCTG TCGTCGGTGT TCGTGCCCAC GGCCTTCATC
ACCGGCCTGT CGGGCGAGTT CTATCGCCAG TTCGCCCTCA CCATCGCCGG CTCGACCCTG
ATCTCGCTTT TGGTGTCGCT GACCCTGTCG CCCGCCATGT GCGCGCTGCT GCTGAAGCCG
CACCGCGCCG CCCACGAGAA GCCGGCCTGG TATGCCCGGC CGGTGGTGGG CTTCTTCGGG
GTCTTCAACC GGGCCTTCGA GGGGCTCGGC AACGGCTATG CGTACCTGAC CGCGCGCCTG
GTGCGGGTGG TGGCGCTGGT GCTGATCGTC TACGTGGGCA TCGTCGCCTT CGGCGGCTAC
CTGTTCACCA CCACGCCTCA GGGCTTCATC CCGCAGCAGG ACCGCGGCTA TCTCATCATC
GCCGCCCAGT TGCCCCCCGG CGCTTCCATG CAGCGCACCG AGACGGTGAT GAAGAAGGCC
GGCGACCTGG TACTCGGCAC GCCGGGCGTC AGCCGCGTCA TCAACATCGC CGGCTTCTCC
GGCGCCACCT TCACCAACGC GCCCAACGCC GGCGCCATGT TCGTGATCCT GAAGCCCTTC
CCCGAGCGCG ACGGCCATCC CGAGCAGACG GCGGCGGCGG TCCAGAAGGT GTTGTTCGGC
AAGATGGCGG GCATCCAGGA AGCCCAGATG ATCGTGGTGC AGCCGCCGCC GGTGCAGGGC
ATCGGCAATG CCGGCGGCTT CCGCATGATG ATCGAGGACC GCTCCGGCGC GGGCCTGCTC
GCCCTGCGCA ACGCCACCTA CGCCATGATG GGCGCCGCCG CCCAGACGCC GGGCCTGATG
CAGGTCTATT CGCTGTTCGA GACCTCGACG CCCCAGCTGT TCCTCGACAT CGACCGGCAG
AAGGCGCAGC TGCTGAAGGT CAACACCGCC GACCTGTTCG CGGCGCTGCA GACCTATATC
GGCTCGTCCT ACGTCAACGA CTTCAACCTG TTCGGCCGCA CCTTCCGGGT GCAGGCCCAG
GCCGACGCGC CGTTCCGCCT CGATCCGAAG GACGTGCTCT CCATCAGGGT GCGCACCGCG
GGCGGGGAGA CGGTGCCGCT CGGCTCCTTC ACCACCGTGC GCGACATTTC CGGTCCCTAT
CGCGTGCCGC GCTACAATCT GTATCCCGCG GCCGAGCTGG ACGGCTCGCC GGCGCCCGGA
TACTCGCAGG GCCAGGCCAT CCAGATCATG CAGGAGCTGG CGGCGAAGGT GCTGCCGCAG
GGCTTCTCCT ATGAATGGAC GGCGCTCGCC TACCAGCAGC AGAAGGCCGG CAACACCGCC
ATCTTCGCCT TCGCCCTGGG CGTGCTGTTC GTGTTCCTGG TGCTGGCGGC CCAGTATGAG
AGCCTGACCC TGCCTCTGGC TGTCATCCTC ATCGTGCCCA TGTGCCTGGT GGCCGCGCTT
ATCGGCGTGA TCCTGAGGGG GCAGGACAAC AACATCCTGA CCCAGGTGGG CTTCATCGTG
CTCATCGGCC TTGCCGCCAA GAACGCCATC CTCATCGTCG AGTTCGCCAA GCAGCTGGAA
GACCAGGGCC ATGGCCGGCG CGAGGCTGCG GTGGAGGCGT CGCGGCTGCG GCTTCGGCCC
ATCGTGATGA CCTCGCTCGC CTTCATCCTC GGCGTGGTGC CGCTGGTGTG GGCCACCGGG
GCCGGCGCCG AGCTGCGGCA GGCGCTGGGC ACGGCGGTGT TCTCCGGCAT GATCGGGGTG
ACGCTGTTCG GCCTGATCTT CACGCCCACC TTCTACGTCT TCGCCCGCTG GCTCGCCGGC
CTCGGCGCGC GCCGCGAGAC CAAGGCCGAG CCGCCGCACC ACCCGGCCCC GGCCGAGTAG
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| Protein sequence | MRFSHFFIDR PIFASVVSAV VMILGAVTYL RLPVAQYPDI APPVITVTGQ YPGASAEIVA
ETVVAPIEQQ INGVEHMLYL ASNSTADGRF SISVTFDIGT NLDIAQVQVQ NRVAIAQPRL
PSEVQQVGVV TAKSSPDLML VVSLYSPDGS RDPLFISNFA NIEIKDVLSR IDGVGSITVF
GSREYAMQIW LDPDRLSQLN LTTTDVVAAL KAQNVQVASG VLNAPPVPEQ RAFQIAVRTL
GRLSDARAFS DIVIKQTDQA LVRLKDVGRV EIAAQDYAST SFLDKDISIQ LGVFQRPGSN
ALATGNAVVA EMARIGKTFP EGLKYGIYYN PTQFIQQSVD AVVHTIGEAI VLVVLVVILF
LQTWRAAIIP ILAIPISLIG TFFVMGLFGF SLNNLSLFGL VLAIGIVVDD AIVVVENVER
NIEAGLSPRD AAYKTMDEVG GALVAISLVL SSVFVPTAFI TGLSGEFYRQ FALTIAGSTL
ISLLVSLTLS PAMCALLLKP HRAAHEKPAW YARPVVGFFG VFNRAFEGLG NGYAYLTARL
VRVVALVLIV YVGIVAFGGY LFTTTPQGFI PQQDRGYLII AAQLPPGASM QRTETVMKKA
GDLVLGTPGV SRVINIAGFS GATFTNAPNA GAMFVILKPF PERDGHPEQT AAAVQKVLFG
KMAGIQEAQM IVVQPPPVQG IGNAGGFRMM IEDRSGAGLL ALRNATYAMM GAAAQTPGLM
QVYSLFETST PQLFLDIDRQ KAQLLKVNTA DLFAALQTYI GSSYVNDFNL FGRTFRVQAQ
ADAPFRLDPK DVLSIRVRTA GGETVPLGSF TTVRDISGPY RVPRYNLYPA AELDGSPAPG
YSQGQAIQIM QELAAKVLPQ GFSYEWTALA YQQQKAGNTA IFAFALGVLF VFLVLAAQYE
SLTLPLAVIL IVPMCLVAAL IGVILRGQDN NILTQVGFIV LIGLAAKNAI LIVEFAKQLE
DQGHGRREAA VEASRLRLRP IVMTSLAFIL GVVPLVWATG AGAELRQALG TAVFSGMIGV
TLFGLIFTPT FYVFARWLAG LGARRETKAE PPHHPAPAE
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