Gene Xaut_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2238 
Symbol 
ID5425485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2498710 
End bp2499372 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID640881491 
Producthypothetical protein 
Protein accessionYP_001417138 
Protein GI154246180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.349608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00515312 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTCGTC TTACCCCCTT CGCTTCTAGG TTCGATCGAC AGGCCGCCAA GCAGGTTCTC 
AGCGGCTACG GCAGCTGGGT CGAGGACCAC ATCGCCCATG GCTACACGGC CTATCTCGTG
ACTTTCATGT TTGATCGCCT TCCTGCTTCA ACTCAAGCCG GGCGTATAGC CGGCATGCTT
GATGCGGTGG AGACGGTGTA CGCGCGGCTG ATACAGTGGT TCGCCAGCCA TCCCAACAGG
CCGTCCCAGC GCCGGTACCT GCCGCATCTT ATTTGCTCGC CTGATCTGCC GGTGTTCAAG
CACGACAAGA TGGCCTTGGT CGATGTTCAA TCCAACGATG GCCTGCACGT GCATGGCATG
CTCATGACGC CGCCGGTGTC CCGCTTCAAG TTCGAGCTGG TTTCGTGGAT CGATGACAAT
GTGGGTCGTC TCATCCATGG CACGCCGATA AGGCGCCTTC ATATTGTCGA GGTTGATCGC
ACGCCGGGGT ACGCCGCAGA GTATGCCTTG AAGGCCAGCG GTACCCGGAT CGATGCCGAC
ACTCTGCTGA TCTTGCCGAA GGCCTTGTCC GAGCGCTCTG ACAAAACAGC TAAGGGTTAC
GATGAGGCCG TGCGAACCGT GCGGGGCGCC TCATTGATGC GGAGCGGCCG GCCGCCGATC
TGA
 
Protein sequence
MSRLTPFASR FDRQAAKQVL SGYGSWVEDH IAHGYTAYLV TFMFDRLPAS TQAGRIAGML 
DAVETVYARL IQWFASHPNR PSQRRYLPHL ICSPDLPVFK HDKMALVDVQ SNDGLHVHGM
LMTPPVSRFK FELVSWIDDN VGRLIHGTPI RRLHIVEVDR TPGYAAEYAL KASGTRIDAD
TLLILPKALS ERSDKTAKGY DEAVRTVRGA SLMRSGRPPI