Gene Xaut_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2185 
Symbol 
ID5424743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2444908 
End bp2445207 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content68% 
IMG OID640881438 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001417086 
Protein GI154246128 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.448638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.262576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTCG GCATTCCCGG TCAGATCGTC GCCGTCGCCG ATGAGGACGC CATGCTGTGC 
GTGGTGGATG TCTCCGGCGT CCGCCGCAGC GTGGATGTGG TGTGCGTCGC CGAGCCCGGT
GCGCCGCTGT CCGACCTCGT GGGCGCGTGG GTGCTGGTGC ATGTGGGCTT CGCCATGAGC
CGCATCGACG AGGAGGAGGC CGCCGCCACC CTCAAGGTGC TCACCGAGAT CGGCGAGGCG
GCGGCGGAAA TGGAAGCGCT GACAAAAGGC AGCGTCGATC TTCACCCCAC CACTGCCTGA
 
Protein sequence
MCLGIPGQIV AVADEDAMLC VVDVSGVRRS VDVVCVAEPG APLSDLVGAW VLVHVGFAMS 
RIDEEEAAAT LKVLTEIGEA AAEMEALTKG SVDLHPTTA