Gene Xaut_2168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_2168 
Symbol 
ID5424473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2427978 
End bp2429846 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content70% 
IMG OID640881420 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001417069 
Protein GI154246111 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.531905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.517298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG ACACCCACGC GCACCAGGAC GATGACGGGC CGAATCCGGG GCTAGGCCTC 
GACCTCGGCG CCCCGTCCGC CCCCGCGCGT CCGGCTCCGC CCCCGGAGGC CCCCGCCGCC
TATCGGGTGC TGGCACGCAA ATACCGCCCG CAGAATTTCA CGGACCTCAT CGGCCAGGAG
GCCATGGTCC GCACCCTGCG GAATGCCTTC TCCTCCGGGC GCATCGCGCA GGCCTATATC
CTCACCGGCG TGCGCGGCGT GGGCAAGACC ACCACCGCGC GCATCCTCGC CCGCGCGCTG
AACTACGAGC CAATGGATGG CAGCGCCGGC GGGCCCAGCC TCGATCTCTC GGTCATGGGC
AAGCAGTGCC GCGACATCAT CGAATCCCGC CATGTGGACG TGATGGAGAT GGATGCGGCG
TCCAATACCT CCATCAACGA CATCCGCGAG ATCATCGAGA GCGCCCGCTA CCGCCCGGTG
ATGGCGCGCT ACAAGGTCTA CATCATCGAC GAAGTGCACA TGCTCTCCAC GGCGGCCTTC
AACGGCCTGT TGAAGACGCT GGAAGAGCCG CCGGAGCATG TGAAGTTCAT CTTCGCCACC
ACCGAGATCC GCAAGGTGCC GGTCACCGTG CTGTCGCGCT GCCAGCGCTT CGACCTGCGG
CGCGTGGAGG CCGGCGAGCT GGCGGCGCAC CTCGCCGGCA TCTGCGCCAA GGAAGGCGTC
ACCATCGAGC CGGAGGCGCT CGCCATCGTG GCGCGGGCGG CGGAAGGCTC GGTGCGCGAC
AGCCTCTCCC TGCTCGACCA GGCCATCGCC CATGGCGGCG GCGCGGTGGG CGCGGAAGAG
GTGCGGCGGC TGCTGGGCCT TGCCGACAAG GGCCGCGTCA TCGACCTGTT CGAGGCGCTG
ATGAAGGGCG AGATGGCCCG CGCGCTCGCT GAATTCCGTG ATCAGTATGA TGCCGGCGCC
GATCCGGCGG TGATCCTCAC GGATCTGGCC GAATTCACCC ATCTGGTCAC CCGCCTCAAG
ATCATGCCCG ACGCGGCGCA AGATGCAGCC CTCGTGGAAG CCGAACGGGT GCGCGGGTTG
GAGATGGCGC AGGGCCTGTC CATGCGGGTG CTGGCGCGGG CGTGGCAGAT GCTCACCAAG
GGCATCGGCG AGGTGCAGCA GGCTCCCAAG CCCGCCCAGG CGGCGGAAAT GGCGCTGGTG
CGCCTCGGCT ACGCCACCGA TCTGCCCACC CCGGACGAAG CCCTGCGGCG CCTGAAAGGC
CAGCCTGTTA CCGACGCCCC GGCTCCGCCC TCCGCCCCCT CTGGCGGCGG CGGTGGAGGC
GGCGGCGGCG GTGCACGGCT GTCCCTCGCT CCCCGTCCCG TCGAGGCCCG GCCGCAGATG
CGGCCCGCGC CGGTGGCGGC CGTGGCGGCT CCGGCGGCGG GTCCCCGCCT CGCCAGCCTT
GCCGACGTGG CGCAGTACGT TGCTGCCAAG CGCGATCTGG CCCTGAAGCA CGCGGTCGAG
ACATCGCTGC GTCCGGTGCA TGTGGAGGAG GGCCGCATCG AGGTGGCGCT GGTACCCGGC
GCTCCCGCCA GCGTCATTCA GGACCTCTCC CGCAAGCTCT CGGACTGGAC CGGCCGGCGC
TGGCTGGTCT CCGTCTCCTC GCAGGCGGGC GGACCGACCT TGGCGGAGGA GAATGCGGCA
GTGAAGGCCG AGCGGGAGGA GGGCATCAAG GCCCATCCGC TGGTGGCCGC CGTGCTCGCC
CGCTTCCCCG GCGCCGAGGT GGTTGACGTG CGGACCCGCG AGGAAGCGCC CATCGACACC
GAGGTGCTCG CCCCCTCGGA AGAAGACCTT TATGCCGGCC CCGGGGCCGA CGACGAACTC
GAATATTGA
 
Protein sequence
MSEDTHAHQD DDGPNPGLGL DLGAPSAPAR PAPPPEAPAA YRVLARKYRP QNFTDLIGQE 
AMVRTLRNAF SSGRIAQAYI LTGVRGVGKT TTARILARAL NYEPMDGSAG GPSLDLSVMG
KQCRDIIESR HVDVMEMDAA SNTSINDIRE IIESARYRPV MARYKVYIID EVHMLSTAAF
NGLLKTLEEP PEHVKFIFAT TEIRKVPVTV LSRCQRFDLR RVEAGELAAH LAGICAKEGV
TIEPEALAIV ARAAEGSVRD SLSLLDQAIA HGGGAVGAEE VRRLLGLADK GRVIDLFEAL
MKGEMARALA EFRDQYDAGA DPAVILTDLA EFTHLVTRLK IMPDAAQDAA LVEAERVRGL
EMAQGLSMRV LARAWQMLTK GIGEVQQAPK PAQAAEMALV RLGYATDLPT PDEALRRLKG
QPVTDAPAPP SAPSGGGGGG GGGGARLSLA PRPVEARPQM RPAPVAAVAA PAAGPRLASL
ADVAQYVAAK RDLALKHAVE TSLRPVHVEE GRIEVALVPG APASVIQDLS RKLSDWTGRR
WLVSVSSQAG GPTLAEENAA VKAEREEGIK AHPLVAAVLA RFPGAEVVDV RTREEAPIDT
EVLAPSEEDL YAGPGADDEL EY