Gene Xaut_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1896 
Symbol 
ID5423676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2138202 
End bp2138999 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID640881144 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001416798 
Protein GI154245840 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.126557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC CTGAAACGCC CATGCCCGAG CTTCTCTCCG CCCCCGACAG CCCGTGCGTG 
GAGAGTCTTG CGCCCTCGCC CAATTTCGGG CCGCGCCGCG CGAAGCTGGA CATGCTGGTG
CTGCACTATA CCGGCATGGC GAGTGCGGAT GCCGCCATCG AGCTGCTGCG CACCCCCGCC
TCGGAGGTGT CCTGCCACTA TGTGGTGCGC GAGGACGGGA GCGTGGTGCA GATGGTGGCC
GAGGCGGCGC GGGCGTGGCA CGCGGGCCGC TCGTCCTGGG AGGGCGTCAC CGACACCAAT
TCCCGTTCCA TCGGCATCGA GATCGTCAAT GGCGGCCATG ATTACGGCCT GCCGGACTTT
CCCGCCGTGC AGATCGCGGC GGTGATCGCC CTGTCGGCCG ACATCGTCGC CCGCCACGCC
ATCCGCGCCG ACCGGGTGCT CGCCCATTCG GACGTGGCTC CGGCGCGCAA GCGCGATCCC
GGGGAAAATT TTCCGTGGGG CGCCCTGCAC GCTGCCGGCA TCGGCCATCT GGTGCCGCCG
TCGCGGGTCG AGGGCGGGCG CTTCTTCATG CTGGGAGATG CCGGGGAGCC GGTGGCGGCG
CTCAAGGCCA TGCTCGCGCT CTACGGCTAC GGCATCGAAC TGACCGACGC CTACGATGCC
GAAACCGCCG ATGTGGTCGC CGCCTTCCAG CGCCATTTCC GCCCCGCCAA GGTGGACGGG
GTGGCGGACG CCGCCACCAT CCTCACCCTG CGCGACCTGA TCGCCACGCG GCCGGGGGAT
GCGCCGCAGG TGGCCTGA
 
Protein sequence
MSMPETPMPE LLSAPDSPCV ESLAPSPNFG PRRAKLDMLV LHYTGMASAD AAIELLRTPA 
SEVSCHYVVR EDGSVVQMVA EAARAWHAGR SSWEGVTDTN SRSIGIEIVN GGHDYGLPDF
PAVQIAAVIA LSADIVARHA IRADRVLAHS DVAPARKRDP GENFPWGALH AAGIGHLVPP
SRVEGGRFFM LGDAGEPVAA LKAMLALYGY GIELTDAYDA ETADVVAAFQ RHFRPAKVDG
VADAATILTL RDLIATRPGD APQVA