Gene Xaut_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1849 
Symbol 
ID5423630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2080362 
End bp2081867 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content70% 
IMG OID640881097 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_001416751 
Protein GI154245793 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.421169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGCCA AAAGAGGTCC GATGACCAGC CTTTCCCTCG GACAGCTCCT CGACGGCCAC 
GCCCGTATCC TATCCGCCGG CGCGGGCGAC GAGCCCGTCT TCGGCCTCTC CGCCGACAGC
CGCAGGATCA ATCCCGGCGA CCTCTTCGTC GCCATTCCCG GCACCCATGC GGACGGCAGC
CGCTTCATCG CCGATGCGGT GGCGCGCGGC GCTTCGGCGG TGCTGATGGA GCCCGCCGCG
CCCCGGCCGG TGCTGCCGCC CCATGTGGCG CTTGCCTTCT CCCTCGACGT GCGGCACTCC
CTGTCGCTGG CGGCGGCGCG CTTCTATCCG CGCCAGCCGG CCACCATCGC GGCGGTGACC
GGGACGGCGG GCAAGACCTC GGTCGCCTTC TTCCTGCGGC AGATCTGGGA GCGGCTCGGC
CACAAGGCGG CTTATTTGGG CACCATTGGC CTGGTGGCGC CGGACGGCTC CACCTATGGC
AGCCTCACCA CCCCCGATCC GGTGGAGCTG CACGCCACCC TCGACCGCCT CGCCGGCGAG
GGTGTCACCC ACATGGCGCT GGAGGCCTCG TCCCACGGGC TGGACCAGAA GCGGCTCGAC
GGTGTGCACT TCACTGCCGG CGGCTTCACC AATCTCGGCC GCGACCATCT GGACTACCAC
CCCACCATCG ACGCCTATTT CCGGGCCAAG CTCCGCCTCT TCACCCAGGT GATGCCGGAT
GACGCCACCG CCGTGGCGGT GACCGGCGCG CCATTTGCTG CCAATGCGCT GGCCTGGGCT
GAGACGCGCG GCCTGAAGCT GCTGCCCATC GGCGAGGGGC AGGCAACCGG TCTCGACATC
TTCGGCACCA CGGGGTCCGG CACCGGGCAG AAGGTGATGT TCGCCGACGG CAGTCATGCC
ATCGTGCCGC TGGTGGGCCG CTTCCAGCTC GACAACGCTT TGCTCGCCGC CGGCCTTGCC
ATTGCCTGCG GGGCGGAGCG GCCGGCGGCG CTGGAGGCCC TCGCATATCT GACCGGCGTG
CCCGGCCGGC TGGAGCGCAT CGGCGACGAT CCGCGCCGGC CCGTGTTCGT GGACTACGCC
CACAAGCCCG AGGCGCTGGC CACCGTGCTC GACACCCTGC GCGCGGCGGT GCCGGGGCGG
CTCATGGTGG TGTTCGGCTG CGGCGGCGAC CGGGACAAGG GCAAGCGCCC CCTCATGGGC
GCCATCGCCG CCTCCAAGGC GGACGTGGTG ATCGTCACCG ACGACAATCC CCGCAGCGAG
GACCCCGCCG CCATCCGCGC CGAAATCCTG GAAGGTGCCC ACGGCGCCAG GGAAATCGGC
GACCGGGCGG AGGCCATCAA GGCGGCCGTG GCGCTGCTTC AGCCTGGGGA TGCGCTCATT
GTTGCCGGCA AGGGTCACGA AACCGGCCAA ATCATCGGCG ACCGGACATA TCCGTTCTCG
GACGCGGCGG AAGTCCGTGC CGCTCTTGAG TCGGGTTCCG GGAGTCCGTC TCTCAATTTG
GGGTAA
 
Protein sequence
MDAKRGPMTS LSLGQLLDGH ARILSAGAGD EPVFGLSADS RRINPGDLFV AIPGTHADGS 
RFIADAVARG ASAVLMEPAA PRPVLPPHVA LAFSLDVRHS LSLAAARFYP RQPATIAAVT
GTAGKTSVAF FLRQIWERLG HKAAYLGTIG LVAPDGSTYG SLTTPDPVEL HATLDRLAGE
GVTHMALEAS SHGLDQKRLD GVHFTAGGFT NLGRDHLDYH PTIDAYFRAK LRLFTQVMPD
DATAVAVTGA PFAANALAWA ETRGLKLLPI GEGQATGLDI FGTTGSGTGQ KVMFADGSHA
IVPLVGRFQL DNALLAAGLA IACGAERPAA LEALAYLTGV PGRLERIGDD PRRPVFVDYA
HKPEALATVL DTLRAAVPGR LMVVFGCGGD RDKGKRPLMG AIAASKADVV IVTDDNPRSE
DPAAIRAEIL EGAHGAREIG DRAEAIKAAV ALLQPGDALI VAGKGHETGQ IIGDRTYPFS
DAAEVRAALE SGSGSPSLNL G