| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1721 |
|---|
| Symbol | |
|---|
| ID | 5423928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1936217 |
|---|
| End bp | 1937695 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640880968 |
|---|
| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
|---|
| Protein accession | YP_001416623 |
|---|
| Protein GI | 154245665 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0380] Trehalose-6-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.868403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.323158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCGCA TCGTGGTCGT ATCCAATCGT GTGGCGGTCC CCCAGCGCTC GGGGGTCACG
GCCGGCGGAC TGGCGGTGGC GGTCAACGCC GCGCTCAAGG ACAAGGGCGG GATCTGGTTC
GGCTGGAGCG GGCGCATCTG CCCGGAACCG TCGGAAATCC CGGAAGTGAC GCGCAAGGCC
GGCATCACCT ATGCGGTGGT GGACCTGAAG GCCGAGGACC ATCAGGAATA TTACAACGGT
TTCGCCAACC GGGTGCTGTG GCCGGTGCTG CACTACCGGG TGGATCTCTC CGAATTCTTC
CGCTCGGATC TGTCGGGCTA CATCCGGGTG AACCGCATGT TCGCGGATCA CCTGGAGAAG
ATCATCCGCC CCGACGACAT CCTGTGGATC CACGACTACC ACATGATGCC GCTCGCCAAA
TATCTGCGCG AGCGCGGCCA CAAGAACCGC ATCGGCTTCT TCCTGCACAT TCCCATGCCG
CCGTCGGATA TCGTCCAGGC CCTGCCGCAG CACGGCGAGA CCGTGGGCGC GCTGGCCTAT
TACGATCTCG TCGGCTTCCA GACCGAGGGC GACCGGGACA ATTTCGCCCA TTACCTGGAG
ATCCGCGGCG GCCAGCTGAC GCCCGACGGC ACCGGCGTCG ATATCGGCGG GCGGCGGGTC
AGGCTCGGCA CCTTCCCGGT GGGCATCGAG ACCGCGGCCT TTGCCCGGCG GGCGCGGCAT
GCCAGCCGCG CCGCCTTCGT GAAATCGTTC CGCGACAGTC TCGTGGGCAA GAAGCTCATC
ATCGGCGTGG ACCGGCTGGA TTATTCCAAG GGCATCCCCA ACCGGCTCGA GGCCTACGAG
CAATTCCTCA AGACCCAGCC CGACTGGCAC GAGCGCGTCA CCTTCGTGCA GATCACCCCC
AAGAGCCGCA CCGACGTGCC GGAATATCAG GAGATGGACC GCTACGTCTC CCACAAGGCC
GGGCAGATCA ACGGCGCCTA TTCCGACGTG TCGTGGACCC CGCTGCGCTA CGTGAACCGC
ACCTATTCGC GCTCGGCGCT CGCGGGCTTC TACCGGGCCG CCCACGTGGC CATGGTGACG
CCCCTGCGCG ACGGCATGAA CCTTGTCGCC AAGGAGTTTG TGGCGGCGCA GGACCCCGCC
GATCCCGGCG TGCTCATCCT GTCCCAGTTC GCCGGGGCGG CGGCCGAGAT GGGCACGGGC
GCGCTCATCG TGAACCCGCA CGATACGGAA GGCATGGCCA ATGCCCTGCG CCGGGCGCTG
GAGATGCCGC TGGCGGAGCG GCGCGAGCGC TATGCCCGGA TGATGCAGGT GCTGGAGGCT
CGCGACATCG ACCGCTGGGC GGCGGACTAT CTCGCCGCGC TGGCGCCGGA AGCCGCGACG
GTGGAGCGGC GCGGATTGAG CCTGCCGCGG GCGGCCATCC GCAGCGTGGT GCGCCTGCCC
GGCGCCTGGC GCTCCGATTT CGTGCCACGG GGGGCGTGA
|
|---|
| Protein sequence | MSRIVVVSNR VAVPQRSGVT AGGLAVAVNA ALKDKGGIWF GWSGRICPEP SEIPEVTRKA
GITYAVVDLK AEDHQEYYNG FANRVLWPVL HYRVDLSEFF RSDLSGYIRV NRMFADHLEK
IIRPDDILWI HDYHMMPLAK YLRERGHKNR IGFFLHIPMP PSDIVQALPQ HGETVGALAY
YDLVGFQTEG DRDNFAHYLE IRGGQLTPDG TGVDIGGRRV RLGTFPVGIE TAAFARRARH
ASRAAFVKSF RDSLVGKKLI IGVDRLDYSK GIPNRLEAYE QFLKTQPDWH ERVTFVQITP
KSRTDVPEYQ EMDRYVSHKA GQINGAYSDV SWTPLRYVNR TYSRSALAGF YRAAHVAMVT
PLRDGMNLVA KEFVAAQDPA DPGVLILSQF AGAAAEMGTG ALIVNPHDTE GMANALRRAL
EMPLAERRER YARMMQVLEA RDIDRWAADY LAALAPEAAT VERRGLSLPR AAIRSVVRLP
GAWRSDFVPR GA
|
|---|
| |