Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1608 |
Symbol | |
ID | 5421672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 1821904 |
End bp | 1822776 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640880855 |
Product | integrase catalytic region |
Protein accession | YP_001416511 |
Protein GI | 154245553 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0124752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC GGCGGGCGTG TAAAGCCACC GGCTTCTGCC GCATGACCAT GAGATACAGA GCCACGCGCG GAAATGACGC CTCGCTGCGT GAGCGCATGA AGGCCATCGC CCAGGAGCGA CGGCGGTTTG GCTACCGCCG TCTCCACGTC CTGCTCAGGC GGGAGGGCTT CCGGGTCAAC CACAAGCGGC TGTTCCGGCT CTACCGTGAG GAACGGCTGA TGGTCCGCCG GCGAGGCGGT CGCAAGCGGG CGATCGGGAC ACGGGCGCCG ATGATGATCC CGATGGGACG GAACGAGCGC TGGTCACTCG ACTTCGTCGC CGACCAGATG ACCGATGGCC GCCGCTTCCG GATGCTGGCC ATCGTGGACG ACTGCACCCG CGAGTGCCTG GCGCTGGTGG CGGACACCTC GCTGTCCGGG GTCAGGGTCG CTCGCGAACT CGATCGGTTG CTGGCAGAGC GCGGCCGGCC GAAGATGATC GTCAGCGACA ATGGCAGCGA GTTCACCTCC AATGCCATTC TGGGCTGGGC CGACGCGGCT CGGGTCGAGT GGCACTCCAT CGCGCCCGGC AAGCCGATGC AGAATGGCTT CATCGAGAGC TTCAACGGCC GCCTTCGGGA CGAGCTGTTG AACGAGACGC TGTTCTCCAG CCTGTCCCAG GCCAGGGCCG CCCTCGCCCG ATGGCAGGTC GATTACAACA CCGACCGACC GCACTCGAAG CTCGAATGGC AGACGCCAAG CGCCTTCGCC TCAACGTTCC ACCCGCGGCG GGATCAGACG CTCCACAACA TGAGCGGCTC CGCGTCTGCC CCCGCCGCCC CGCACACCCG AAAGGGCAAA TCCAACCGCC AGAACGAACT CAAAGCTGGA TAG
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Protein sequence | MSERRACKAT GFCRMTMRYR ATRGNDASLR ERMKAIAQER RRFGYRRLHV LLRREGFRVN HKRLFRLYRE ERLMVRRRGG RKRAIGTRAP MMIPMGRNER WSLDFVADQM TDGRRFRMLA IVDDCTRECL ALVADTSLSG VRVARELDRL LAERGRPKMI VSDNGSEFTS NAILGWADAA RVEWHSIAPG KPMQNGFIES FNGRLRDELL NETLFSSLSQ ARAALARWQV DYNTDRPHSK LEWQTPSAFA STFHPRRDQT LHNMSGSASA PAAPHTRKGK SNRQNELKAG
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