| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1596 |
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| Symbol | |
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| ID | 5423852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1805829 |
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| End bp | 1807025 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640880843 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001416500 |
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| Protein GI | 154245542 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.566633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCTG TCTTATGGAT CGTGACGCCG GCGGTGATCC TCGCCGGCGC CGTCACGTGG
CATTTCGGGC TGCTGACGCC CGGCCCGGAC GCCCCCAAGG CGAAGGCTGT CGCCCCACCC
ATTCCGGTGG TGGCGGATAC GGTGCGGCTT CAGGACGTGC CCATCTACGC CCTCGGCATC
GGCACGGTGC AGGCCTCCAA CACCATCGTG GTGAAGGTGC GCGTCGACGG CGAATTGCAG
AAGGTCGCCT TCACCGAGGG ACAGGACGTG AAGGCGGGTG ACCTGCTCGC GCAGATCGAT
CCGCGCCCGT TCACGGCGGC GCTCAACCAG GCCAGGGCGG CCAAGGCCAA GGACGAGGCC
CTGCTCGCCA ACGCCAAGAT GGATTACGAG CGCTACAAGA CCCTTGTTCC CAAGCAGGCC
GCATCCCAAC AGCAGCTCGA TACCCAGTCG GCGCTTGTGG CCCAGTACCA GGCGGCGGTG
GAGGGCGATC AGGCCGCCAT CGACAATGCC CAGGTGCAGC TCGACTATGC CACCATCCGC
GCGCCCATTT CCGGGCGGAC CGGCGTGCGG CTCGTGGACC AGGGCAACAT CGTCCACGCC
TCCGACACCG GCGGGCTGGT GGTGATTACC CAGGTGAAGC CGGTCGCCGT GCTGTTCGCC
CTGCCGCAGG ACCGGTTGGA GGACGTGCGC GAGGCGATGG CGCGCGGGCC GGTGGAGGTG
ATCGCCCTGA AGCGGGACGG CACCACGCAG ATGGGCCAAG GCCAGATCCA GTTGATCGAC
AACCAGATCA GCTCCGATAC CGGCACCCTG CGTCTCAAGG CGCTGTTCCC CAACGACGAC
CTGAAGCTCT GGCCCGGCGC CTTCGTCAAC GTGAAGGTGC TGGTGGACAC CCGCCGCGCG
GTGGCGACGG TTCCCGCGCA GGCGATCCAG CGCAGCCCCG ACGGGTTCTA TGTCTATCGG
GTGAAGGCCG ACGACACCGT GGAGCAGCGC CCCGTGAAGG TGGGCGGCAC CCGCGACGGC
GTCTCCTTCC TTGAGGCCGG CCTCACCGCC GGCGACCGGG TGGTGGTGGA CGGCCAGTAC
AAGCTGACGC CGGGCGCCCG GGTCTCGGCG CGGCAGGCGC CGGCCGGCAC GCCCGGAACC
GATGGCGCAC CCGGCGGTGG AACGCTCACC AGCGCCAGCG CGGAGAGCCC GGCATGA
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| Protein sequence | MRPVLWIVTP AVILAGAVTW HFGLLTPGPD APKAKAVAPP IPVVADTVRL QDVPIYALGI
GTVQASNTIV VKVRVDGELQ KVAFTEGQDV KAGDLLAQID PRPFTAALNQ ARAAKAKDEA
LLANAKMDYE RYKTLVPKQA ASQQQLDTQS ALVAQYQAAV EGDQAAIDNA QVQLDYATIR
APISGRTGVR LVDQGNIVHA SDTGGLVVIT QVKPVAVLFA LPQDRLEDVR EAMARGPVEV
IALKRDGTTQ MGQGQIQLID NQISSDTGTL RLKALFPNDD LKLWPGAFVN VKVLVDTRRA
VATVPAQAIQ RSPDGFYVYR VKADDTVEQR PVKVGGTRDG VSFLEAGLTA GDRVVVDGQY
KLTPGARVSA RQAPAGTPGT DGAPGGGTLT SASAESPA
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