| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1048 |
|---|
| Symbol | |
|---|
| ID | 5425252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1200594 |
|---|
| End bp | 1202243 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640880295 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001415956 |
|---|
| Protein GI | 154244998 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.356388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA AGCCGATCCT CTCCGTCGCC GGTGTCAGCG TCACCTTCGG GACGTTTCCG
GCCCTCACCG AGGTGACCTT CGACGTGGCC GAAGGGGAAC TGGTGGCGCT CATCGGCCCC
AACGGCGCCG GCAAGACCAC CATCCTCAAC GTGCTCTCCG GAGAAGTGCC GCCGACGGCC
GGAACGGTCA GCTTTCGCGG CCGGCCGCTG GCGGGCCTCA AGCCCCACGA GGTGGCGCGC
CGGGGCCTCG CCCGCACCTT CCAGGCGGCG GAGCCGTTCC AGCACCTCAC GGTGCGCGAA
AACGTCATGG TGGGCGGCGT CCCTGCCTCC GGTCTAGGGC TCATCGCCGG CCTCGGCTTC
CGCGCCAACA GCCTGCCCGC CGCCCGCCGC GTGGCCAGCG AGGCGGATGC CCACTTGGAG
CGGGTCGGGC TGCTGGAGAA GGCGGACCTG CCGGCCGGCC TCTTGACTGC CGGCCAGCGG
CGCCTGCTCA GCATCGCGCG GGTGCTGGCG ACCGGGGCGT CCATGCTGGT ACTGGACGAG
CCGGGCGCGG GCCTCAACGA GAGCGAGAAG ACCTTTCTCG GCGACGTCAT CCTCTCCTTG
TGGCGCGACG GCCGCACAGT GCTGTTCGTC GAGCACGACA TGCCACTGGT GAGCCGCATC
GCCCAGCGGA TCATGGTGCT CGACCGCGGC CATCTCATCG CCGATGGAGC GCCCGATGAG
GTGCGCGCCA ATCCGAAGGT GATCGAGGCC TATCTCGGCC GCCGCGCGCC GGAGGAGCCC
GCCGCGGCGC CCGTCGCCGC CATCGTCGCA TCGGTCGCCG AGGCCAACTC CGAGCCGGTG
AGGCCGGCGG CGCGGCTGCT GACGGTCCGG GATCTCAACG TCACCTATGG CGGCCTGACG
GCAGTAGACG GCGTATCGCT CCACATCGAC GAGGGCGAGG TGCTGGCGCT GGTCGGCGCC
AACGGCGCGG GCAAGAGCAG CTTGCTCAAG GCCATCGGCC GGGTGGTGAA CGCGCGCGCC
GTCGAGATGT CCTTCGCCGG CGAGGAGATC GCCCGGCTCC CGGAGGATGC CGTGGTGGCC
CGCGGCCTCT GCCTCGTGCC CGAGGGGCGC GCCCTGTTCG GCTCGCTCAC GGTCGCCGAG
AACCTGGCGG CCGGCCGCTA TGCCCGCCGT CGCGCCCGCG GCTTCACGCA CCTTCTCCAC
CAGAGCCGCG CGGAGCGGGC GGTGTTCGAA GCCCGCCTCG ATATGGTGTA CCAGTTGTTC
CCGGTGCTGA AGGAGCGGGC GCGTCAGCTC GCCGGCACCC TGTCCGGCGG ACAGGGCCAG
ATGCTCGCCA TCGGTCGCGC CCTCATGGGC GAACCGCGCC TGCTCATGCT CGACGAGCCC
TCCCTCGGCC TCGCTCCGCA GGTGATCGAC GAGATCTTCG CCTCCATCGC GCGGCTGAAA
AGGCAGGGCC TCACCATCCT GCTGGTGGAG CAGAACATCG CCTCGGCCCT CGCCATCGCC
GACCGGGGCC TGGTGCTCGC CAACGGGCGT GTCGCCGCCA GCGGCACGGG CGCCGAGCTG
CTGAGGGATC CCCGCATCAC CGAGGCCTAT CTGGGCACCA GCGACAGCCA GGCATCCGGC
TGCAGCGCAC CGCGCATGAT CGCGGTCTAG
|
|---|
| Protein sequence | MNAKPILSVA GVSVTFGTFP ALTEVTFDVA EGELVALIGP NGAGKTTILN VLSGEVPPTA
GTVSFRGRPL AGLKPHEVAR RGLARTFQAA EPFQHLTVRE NVMVGGVPAS GLGLIAGLGF
RANSLPAARR VASEADAHLE RVGLLEKADL PAGLLTAGQR RLLSIARVLA TGASMLVLDE
PGAGLNESEK TFLGDVILSL WRDGRTVLFV EHDMPLVSRI AQRIMVLDRG HLIADGAPDE
VRANPKVIEA YLGRRAPEEP AAAPVAAIVA SVAEANSEPV RPAARLLTVR DLNVTYGGLT
AVDGVSLHID EGEVLALVGA NGAGKSSLLK AIGRVVNARA VEMSFAGEEI ARLPEDAVVA
RGLCLVPEGR ALFGSLTVAE NLAAGRYARR RARGFTHLLH QSRAERAVFE ARLDMVYQLF
PVLKERARQL AGTLSGGQGQ MLAIGRALMG EPRLLMLDEP SLGLAPQVID EIFASIARLK
RQGLTILLVE QNIASALAIA DRGLVLANGR VAASGTGAEL LRDPRITEAY LGTSDSQASG
CSAPRMIAV
|
|---|
| |