Gene Xaut_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1008 
Symbol 
ID5422958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1135169 
End bp1140667 
Gene Length5499 bp 
Protein Length1832 aa 
Translation table11 
GC content73% 
IMG OID640880255 
ProductBeta-ketoacyl synthase 
Protein accessionYP_001415916 
Protein GI154244958 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC GCACCGCCGG CAGCTCTGCG ACCACCACCG AACGGGCGTT GCGCGCGATC 
CGCGACCTGC GCGCCAAGGT GGATGTGCTT GAGCGCCGGC AGGGCGAGCC GGTGGCCATC
GTGGGCATGG GATGCCGCTT TCCTGGCGCC GCAGACCTCT CGGGGTTCTG GGACCTTCTG
GTTCGGGGCG AGGACCCCCT TGGCCCGGTG CCGCCGGACC GCTGGAACAT TGACAGCCTC
TACAATCCCG ACCCACAGGC GCGCGGCAGG ACAGTGAGCC GCGAGGGCGG CTATCTGCCG
AACCTCGACA GGTTCGACGC CGACTTCTTC GGCATCACCC CGCGCGAGGC GCCGTTCATC
GATCCGCGCC AGCGGCTGGT GCTGGAAACC GCCTGGGAGG CATTGGAGGA TGCCGGCATT
CCGGCCGACC GCATCGCCAG CTCCCTCACC TCGGTGGTGG TGGGCACGCT GACCAACGAC
TACAACCAGC TGATCACGGC GGACGACCGC TGGGTCAGCG CTGCCACCGG CACCGGCACC
TCCAATTCCA TCATCGCCAA TCGGCTGTCC TATGTGCTGG ACCTCCACGG CCCGAGCCTC
ACGGTGGACA CCGCCTGCTC GGGCTCGCTC TTGGCGCTGC ACCTTGCCTG CCAGACCCTG
CGCAACGGCG AGGCGACGCT CGCCCTGTGC GGCGGGGTGG CGGTGAATCT GGTGCCGGCG
CCGGACATCT GCTTCTCGCG CATGGGGGCG CTCTCCCCGC GCGGGCGCTG CCACACCTTC
GATGCCGCCT CCGACGGCAT GGCGCGCTCG GAAGGCGCCG GCATGGTGGT GCTGAAGCTG
CTGTCGCAGG CTGAGGCCGA CGGCGACCGC ATCTATGCCC TGATCCGCGC CAGCGCGGTG
AACCATGACG GGCGCAGCAA CGGCATCGCC GCCCCCAACG GGCAGGCGCA GGAACGGCTG
TTGCGCGAGG CCTATGGCAA GGCCGGCATC GCGCCCGGCC GGGTGCAATA TGTGGAGGCC
CACGGCACCG GCACCATCGT CGGCGACCGC ATCGAGCTGC AGGCCCTCGC AAAGGTGCTG
GGCACCGATC GCGCGCCGGG GCACGGCTGC GTGGTGGGCT CGGTGAAGAG CAATATTGGC
CACACCGAAT CCGCCGCCGG CATCGCCGGC ATCATCAAGA CCGCGCTGGC GCTGAAGCAC
CGGCTGCTGC CGGGAAATCT GCATTTCGAG ACCCCCCATC CGGCTTTGTC GGAGGCGCCT
TTCGCGCTGG AGGTGCGCAC CGCCGCAGGA TCTTTTCCCG CGCCGGACCA GCCGATCATC
GCCGGGGTCA GCGCCTTCTC GTTCGGCGGC GCCAATGTGC ATGTGGTGCT GGAGGAGGCG
CCAGCGGTCC TCGACCCGCC CACCGTCTCC GCGCCTACCG TCTCCGCATC TGCCGAAGCC
GCGACGGCCT ATGTGCTGCC CCTGTCGGCG AAATCGCCGG ATGCGCTCAC GGCTCTGGCC
CGGTCCTATG CGGCCTTCCT GCGGGGGCCC GATGCGCCGG CGCTTGCCGA CATCTGCGCC
ACCGCTGCCC TGCGCCGTAC GCCCCACGCC TTTCGCCTTG CAGTGGCCGC TACCAGCCGG
GAGGAGATGG CCGACCGGCT GGAGGCCCAT CTCGCCGGCG AGGACGCGCG CCATGTGGCC
ACCGGTACCG CGCTGGATGG AGAGGCGGGC ATGCCGCTGG CCTTCGTCTT CTCGGGGCAG
GGCTCCCACT GGCTGGGCAT GGGCCGCGAC CTCTATGCCG CCGCGCCCGC CTTTCGCGCG
GTGATCGACC GGCTGGACGC CCTGGTGCGC GCCGAGGCCG GCTGGTCGCT GATCGCGGAG
CTGAATGCGG CACCGGGCGC CTCGCGGCTC GACGACATCG ATGTGGTGCA GCCCGCGATC
TTCGCCATGC AGGCGGGCCT CGTAGCCCTG TGGCGGGCGC TCGGCGTGGT GCCGGAGGTC
GTGATCGGCC AGAGCATGGG CGAGATCCCC GCCGCCTTCG CCGCCGGCAT CCTCTCGCTG
GAGGATGCGG CGCGGGTCAT CCTCGCCCGC AGCCGGCTGC TGCGCACCAA GCGCGGGGCG
GGCGCCACCG CCGTTGTGGG CCTGCCGGCG GCGGAGGTGG AAGCCGCGCT GGCGCCGCAG
GCCGACCGGC TCGCCGTGGC CGGCGTCACC AGCTTCGCCT CCACCCTCAT CGCCGGGGAT
GGCGATGCGC TCAAAGCCTA TCTGGCGGAG CTGGAGGCAG CGGGCATCTT CGCCCGGCTT
TTGGAGAATG TGGACGTGCC GGCCCACAGC CCGGCCATGG ACAGCCTGCG CCCGGCGCTG
GAAAAAGCCC TCGCCGGAAT AGCGCCCCAG TCGGCGCAGG TGCGGTTCCT CTCCACGGTG
ACGCTGAAGG ACGAGCCCGG CTCGAACCTT GATGCCGCCT ATTGGAGCCG CAACCTGCGC
GAGCCCTTCC GCGTCGCCGA TGCGGTGGCC AGGCTCTCCC GCGAGCGGGC GCATCTGTTC
CTCGAAATCA GCCCCCATCC GGTGCTGGTG GGGGCGCTGC GCCAGATCCT CCAGCATGTG
GGCGCCGACG GCGTCGCGCT GGGCAGCCTG ACGCGGGAGG GGGACGGCGC GCTGGATCTC
GCCACCGCGC TCGGCGGGCT GTGGGCCAAC GGTTTGGCGG TGGACTGGGG TCGCGTGCTG
CCCGCGGGGC GCTGCGTGTC GCTGCCGGCC TATCCCTGGC AGCGCGCGCA TTTCTGGGTG
GACCAGATCG CCGCCACCAC CGGCGGTTCG GCGGGCGCGC GCAAGGCGGG CAGCCATCCT
TTGCTCGGCG CGCCGTTTGC GGCGGCGCAG GGCGGCGCGC ACTTCTGGGA TGGGGAGATC
GACAGTTCGA GCCTGCCGTG GCTGGGCGAC CATGCCCTCT CCGGCGTGCC CGTCTTGCCC
GGCGCGGCCT ATCTGGAGAT GGCGCTGGCG GCCGTGCGAG AGGCGTTGCC GGGGCAGGCT
CTGGTGCTGG AAGATGCCCG CTTCGAGAAG ATGCTGCTGT TGCCCGAGGG CGAGGCGCGC
CGCCTGCAGG TGACGCTGAC GCGCACCGGC GGCGATGGCG CTGAGGTGGC GGTGCTGAGC
CGACCTGTTC AGGGCGAGGA TGACTGGACC CTGCATGCGC GCATCGGCGT GCGCCGCTCT
GGCCCCGAGG CGCCGGCCGG CCCCGTTCCG GTGGTGGATG AGGCCGCCGC GCCCGTCGAT
CTCGCCGGCT TCTACCGCCA GTTTGCTGCC GGGGGGCTCG ATTATGGCCC GGCTTTCCGG
GGCGTGCGGA CGCTGCGGGC CGGCGCCACC GATGCGTGGG CGGAAGTGGC GCTGCCGGAG
GGCCTGTCCG ACACCGCCTT CGGCCTCCAT CCGGCGCTGC TGGACGGGGC GTTCCAGGTG
GTGGCTGCCA TCGGGACCGA GGGGGACGGC GCGCGGCCGG TCTACCTGCC GCAGGGGGTG
GGTAGGCTGG CGCAGCTTGC GGCGGTGCCG GCGCGGGTCT TCGTCCATGC CCGGCTGGTA
TCCGATGCTG TGCCCGGCGC GCCGCGCCTT GCCGCCGACC TCACCCTGAG CGATGCGGAC
GGCACAGTGG TGGCGCGCGT CACCGGCCTT GCCCTGCGCC GGGTGGACGA GATGCGGCCG
CGGGCCAGCG CGTCCCTGCG CGACAGCCTC TATCATCTGG AATGGCACGA ACGCCCGCGC
GCGTCACACA CAGCGTCGGC CGATGCCGCC GGCCTGTGGC TGCTTTCAGG GGTGCCGGGC
GCCGTGGCCG ACAGCCTCGC CGAGGCCCTG CGCCAGCGGG GCGTGGAGGT GCGCCTGGTC
GCGCCCGGCG GGGATCTGGC GGCCGACATC GCCGCGGCCG GCGCCGCCCT GCGTGGCATG
GTGCTGCTGG AAGACGGGGC AGGCGGCACG GATGTGCAGG AGGCCGTGTT CGAGGCGGTG
GCGGGGCGCG CGCTTCCGGC GGTGAAGGCG CTGGCGGAAG GGGCGGGAGG GGCGCGTCTG
TTCATCGTCA CCCATGGGGC AATCGCCTGC GATGGGGCGG ACCCGGCGCC CGATCTGGTG
GCGGCGCCGC TTTGGGGCTT CGGCCGGGTG GTGGGCCTCG AGCATGCGGA AATCTGGGGG
GCGCAGATCG ATCTTGATCC CGCCGACCCC GCCGGCTCCT GCGCGGCGGC GGCCGACGAG
ATGCTGGATC TTGGCGCCGA CCGGGAGATC GCCGACCGGG AAATCGCTTT GCGTGCCGGC
CGGCGGCGGG TGGGCCGGCT CGCCCGCCTG CCGAAGCCAG ATATTGCGGC CGGCCCGGTG
CTGCTGCGGC CGGATGCGAG CTATCTGGTC ACCGGCGGCC TCACCGGACT TGGCCTTGAG
ACCGCGCGCT TCCTGGTGGC GCGGGGCGCC CGGCGGCTGA TCCTCATCGG CCGCACGGCC
TTGCCGCCGC GCGCGGACTG GGCGGCCCTG CCCCCCGAGA GCGAGGCGGG ACAGCGCGTC
GCCGCCGTGC GGGGGCTGGA ACAGCTGGGC GCTTCCGTGC GGGTGGAGGC GTTCGACGTG
GCGGATGAGG CGCGCCTCGC CGCCTTCCTC GCCGCCTATC GGGCCGAGGC GCACCCGCCC
ATCCGCGGCG TGGTGCATGC GGCGGGGGTG ATCCAGGACG CCCTGCTGCT GCGCATGACC
GGCGAGGACA TTGCCGCCGT GATGCGGCCC AAGGTGGCCG GCGCCCTCGC GCTGCACCGG
CAGACGGCGG ACCTGCCGCT GGATCATTTC GTGCTGTTCT CCTCCGCCTC CTCGGTGCTG
GGGCAGGTGG GGCAGGCCGG CTATGGCGCC GCCAACGCCT TCGAGGATGC GCTGGCCGCT
CACCGCCGCG CAGCGGGCCT GCCGGCCACC GCCATCAATT GGGGGCCGTG GGCGGACATC
GGCCTGTTCG CGCGCCTTGG CCTTGCCGAG CGGGCCGGGC TGTCGGGCGT CGAGCCCATC
GCGCCGGAAC AGGGCATGGC GGCCCTCGAC CACCTCATGG CCCGGGGGGA GACGCAGGCG
CTGGTGCTGA ACGCCGACTG GGCGCAGGTG CCGGCATCGG CGCGGCTGGA GCTGCTTCAG
GCGGCGTCCG CGCCTGATAC CCCCTCCACG AGCGCCGGCG TCGCCGACCT GCTGCTGATG
GCGCCGGCCG AACGCAAGGC GGAGCTGCGC GCGCGCCTCG GCGCTATCGT CGCCGCTGTG
CTGCGCTTCG ATGCGGACAA GCTCGACCAC CGGCGGGCGC TGACCACCTT GGGCATGGAT
TCCATCATGG CGGTGGAAAT CCGCAACCGC GTCAGGCGCC AGTTCGACCT GACGCCCAGC
ATCGTGGACC TGTTCACCGG CTCGGTGGCG CGCCTTGCCG ACTGGCTGGA CGGGGAGCTG
GCCGCCGACG ATCGCCTCAA GGCCCTGCTG GACGAGATCG AGGACCTGCC GGAAGCGGAA
GTCGAGGCGC TGCTCGCGTC CGGGCAGAAG GTGGCCTGA
 
Protein sequence
MPDRTAGSSA TTTERALRAI RDLRAKVDVL ERRQGEPVAI VGMGCRFPGA ADLSGFWDLL 
VRGEDPLGPV PPDRWNIDSL YNPDPQARGR TVSREGGYLP NLDRFDADFF GITPREAPFI
DPRQRLVLET AWEALEDAGI PADRIASSLT SVVVGTLTND YNQLITADDR WVSAATGTGT
SNSIIANRLS YVLDLHGPSL TVDTACSGSL LALHLACQTL RNGEATLALC GGVAVNLVPA
PDICFSRMGA LSPRGRCHTF DAASDGMARS EGAGMVVLKL LSQAEADGDR IYALIRASAV
NHDGRSNGIA APNGQAQERL LREAYGKAGI APGRVQYVEA HGTGTIVGDR IELQALAKVL
GTDRAPGHGC VVGSVKSNIG HTESAAGIAG IIKTALALKH RLLPGNLHFE TPHPALSEAP
FALEVRTAAG SFPAPDQPII AGVSAFSFGG ANVHVVLEEA PAVLDPPTVS APTVSASAEA
ATAYVLPLSA KSPDALTALA RSYAAFLRGP DAPALADICA TAALRRTPHA FRLAVAATSR
EEMADRLEAH LAGEDARHVA TGTALDGEAG MPLAFVFSGQ GSHWLGMGRD LYAAAPAFRA
VIDRLDALVR AEAGWSLIAE LNAAPGASRL DDIDVVQPAI FAMQAGLVAL WRALGVVPEV
VIGQSMGEIP AAFAAGILSL EDAARVILAR SRLLRTKRGA GATAVVGLPA AEVEAALAPQ
ADRLAVAGVT SFASTLIAGD GDALKAYLAE LEAAGIFARL LENVDVPAHS PAMDSLRPAL
EKALAGIAPQ SAQVRFLSTV TLKDEPGSNL DAAYWSRNLR EPFRVADAVA RLSRERAHLF
LEISPHPVLV GALRQILQHV GADGVALGSL TREGDGALDL ATALGGLWAN GLAVDWGRVL
PAGRCVSLPA YPWQRAHFWV DQIAATTGGS AGARKAGSHP LLGAPFAAAQ GGAHFWDGEI
DSSSLPWLGD HALSGVPVLP GAAYLEMALA AVREALPGQA LVLEDARFEK MLLLPEGEAR
RLQVTLTRTG GDGAEVAVLS RPVQGEDDWT LHARIGVRRS GPEAPAGPVP VVDEAAAPVD
LAGFYRQFAA GGLDYGPAFR GVRTLRAGAT DAWAEVALPE GLSDTAFGLH PALLDGAFQV
VAAIGTEGDG ARPVYLPQGV GRLAQLAAVP ARVFVHARLV SDAVPGAPRL AADLTLSDAD
GTVVARVTGL ALRRVDEMRP RASASLRDSL YHLEWHERPR ASHTASADAA GLWLLSGVPG
AVADSLAEAL RQRGVEVRLV APGGDLAADI AAAGAALRGM VLLEDGAGGT DVQEAVFEAV
AGRALPAVKA LAEGAGGARL FIVTHGAIAC DGADPAPDLV AAPLWGFGRV VGLEHAEIWG
AQIDLDPADP AGSCAAAADE MLDLGADREI ADREIALRAG RRRVGRLARL PKPDIAAGPV
LLRPDASYLV TGGLTGLGLE TARFLVARGA RRLILIGRTA LPPRADWAAL PPESEAGQRV
AAVRGLEQLG ASVRVEAFDV ADEARLAAFL AAYRAEAHPP IRGVVHAAGV IQDALLLRMT
GEDIAAVMRP KVAGALALHR QTADLPLDHF VLFSSASSVL GQVGQAGYGA ANAFEDALAA
HRRAAGLPAT AINWGPWADI GLFARLGLAE RAGLSGVEPI APEQGMAALD HLMARGETQA
LVLNADWAQV PASARLELLQ AASAPDTPST SAGVADLLLM APAERKAELR ARLGAIVAAV
LRFDADKLDH RRALTTLGMD SIMAVEIRNR VRRQFDLTPS IVDLFTGSVA RLADWLDGEL
AADDRLKALL DEIEDLPEAE VEALLASGQK VA