Gene Xaut_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0976 
Symbol 
ID5424304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1092868 
End bp1093476 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID640880223 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001415884 
Protein GI154244926 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC TCTCGGCCCG CCATGGGCAC GCTGCGCCTG CCGCCGATCG CGGGCACGAT 
GGGGCCGCGG CGGCGCGGTT CGACGCGCTG ATCCTGCCGC ACCTCGACGC AGCCTATAAC
CTCGCGCGCT ATCTGAGCCG GGATCCGGAT GCGGCGCAGG ACATCGTGCA GGACGCGTTT
CTGCGCGCCT ATCGCAGCTT CGCCGACTTC CGCGGCCTGA GCCCGCGGGC GTGGCTGCTC
GCCATCGTGC GCAATTGCCA TGCGACATGG CGGATGCAGC ATCGGCGGGC GCCGCAGTCC
GCCCCCCTGC CGCATGGCGA CGGAGAGGCG CCGGAGGATG CGGCCAGTCT TCTTGTTGAC
GGGGACACGC CCGAGAGCCT TCTGCTGCGC CGCACCGAGG CGGAAGCCGT GCGCGCGCTG
CTGGAACACC TTCCCGAGCC GCTGCGTGAG GTGCTGGTGC TGCGCGAGCT GGACGAATTG
TCCTACCGCG AGATCGCGGA GGTGGCGGGG GTGCCGGTGG GGACGGTGAT GTCGCGCCTG
TCCCGCGCGC GCCGTCTGTT CGCCGACCTC TGGTCGCGCG CCGCACCTGA CGGGGAGGCG
GTCCCATGA
 
Protein sequence
MAELSARHGH AAPAADRGHD GAAAARFDAL ILPHLDAAYN LARYLSRDPD AAQDIVQDAF 
LRAYRSFADF RGLSPRAWLL AIVRNCHATW RMQHRRAPQS APLPHGDGEA PEDAASLLVD
GDTPESLLLR RTEAEAVRAL LEHLPEPLRE VLVLRELDEL SYREIAEVAG VPVGTVMSRL
SRARRLFADL WSRAAPDGEA VP