Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0940 |
Symbol | |
ID | 5423189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 1060097 |
End bp | 1060945 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640880187 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_001415848 |
Protein GI | 154244890 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.60064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCT TGCGATTTGG ACCCGCCGGC ACCGAAAAGC CGGGCGCCCT CGATGATGCC GGCCGCATCC GCGACCTCTC CGGCGTGATC GCGGACCTCT CGGGGGATGT GCTTTCGCCG GGCAGCATTG CGCGCCTGTC CGCCCTCGAT CTGTCCACGC TGCCGGTGGT GGAGGGCGAA CCGCGCCTGG GGTGCCCGGT GGGGAACGTC GGCAAGTTCA TCGCCGTCGG CCTGAACTAT GCAGACCATG CCGCCGAGGC CAACATGGCT CTTCCCAGCG AGCCCGTCAT CTTCTCCAAG GCCACGAGCT GCATCGTCGG CCCCAACGAC GACGTGGTCC TTCCGCCGGC GTCCGCCAAG GGCGACTGGG AAGTCGAATT GGGCATCGTC ATCGGACAGA CCACACGCTA CGTCACGCCC GACGCGGCGC TGGGCCATGT GGCGGGATAT TGCCTGGTGA ACGACGTGTC CGAACGCGAA TACCAGCTGG AGCGCGGCGG CACGTGGGAC AAGGGCAAGG GCTTCGACAC CTTCGGGCCG ATCGGGCCTT ATGTCGTCAC TGCCGATGAG GTTCAGGATC CGCAGGCGCT GGACCTGTGG CTCGACGTCA ACGGACGGCG CATGCAGAGC GGCAACACCC GCACCATGAT CTTCGATGTC GCGACGCTGG TGAGCTACAT CAGCCGCATC ATGACCCTGT TTCCGGGCGA TGTGATTACG ACCGGCACGC CGCCGGGCGT GGGCATGGGG CAGAAGCCGG GGCCGATCTA CCTGAAGGCC GGCGACGTGA TGGAACTGGG CATCGAAAAG CTCGGAACCC AGAGGCAACG GGTGCGGGCC TGGGCTTGA
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Protein sequence | MKLLRFGPAG TEKPGALDDA GRIRDLSGVI ADLSGDVLSP GSIARLSALD LSTLPVVEGE PRLGCPVGNV GKFIAVGLNY ADHAAEANMA LPSEPVIFSK ATSCIVGPND DVVLPPASAK GDWEVELGIV IGQTTRYVTP DAALGHVAGY CLVNDVSERE YQLERGGTWD KGKGFDTFGP IGPYVVTADE VQDPQALDLW LDVNGRRMQS GNTRTMIFDV ATLVSYISRI MTLFPGDVIT TGTPPGVGMG QKPGPIYLKA GDVMELGIEK LGTQRQRVRA WA
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