Gene Xaut_0902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0902 
Symbol 
ID5421537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1004672 
End bp1005169 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID640880144 
Productphenylacetic acid degradation protein PaaD 
Protein accessionYP_001415810 
Protein GI154244852 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC ACGCCCCTCA TCCCGTCCCG CCGCGCACGC CACAGGACAC CGCGCGTCTA 
AGCGCGGAGG CCATGTGGGC CACCGACCAT GCGAGCCAGG GCCTCGGGAT GGAGCTGGTG
GCGGTGGGCC CCGGCACGGC GACGCTCTCC ATGACGCTCA CCGAGCGAAT GTGCAACGGC
TTCGGCATGG GCCATGGCGG CTTCATCTTC GCCCTTGCAG ACAGCGCCTT CGCCTTTGCC
TGCAACTCCT ATGACGAGCG CACCGTGGCG GCCCATTGCG CGGTCACCTA CCTGCGCCCC
GGCACCCGCG GAAAGACACT CGTCGCGACG GCGCGGGAGA TCGCCCGCAC AGGACGCTCG
GGCATCTACG ACGTGGAGGT GAGCGAGGAC GGCGTGGTGA TCGCGCAGTT TCGCGGGCAT
TCTCGCACCA TCGGCGGGGC GTTGATCGCC CCGCCCCCAA GCGCGCCGGA GAGCCGCGAC
CACACGACCA CAGCTTGA
 
Protein sequence
MNTHAPHPVP PRTPQDTARL SAEAMWATDH ASQGLGMELV AVGPGTATLS MTLTERMCNG 
FGMGHGGFIF ALADSAFAFA CNSYDERTVA AHCAVTYLRP GTRGKTLVAT AREIARTGRS
GIYDVEVSED GVVIAQFRGH SRTIGGALIA PPPSAPESRD HTTTA