| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0773 |
|---|
| Symbol | |
|---|
| ID | 5421358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 857707 |
|---|
| End bp | 859152 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640880015 |
|---|
| Product | peptidase C14 caspase catalytic subunit p20 |
|---|
| Protein accession | YP_001415681 |
|---|
| Protein GI | 154244723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.230608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGC TGGTGATCGG GAACGGTGCC TACCGCGATT GCGGCGTGCT GAAGAACCCG
GTGAACGACG CCGACGACAT GGCGACGAAG CTCAGGTCCT ACGGATTCCA TGTGGTCTCG
AGCGCCGACG CGACGCGCAT CGACATGGAC CGCAGGCTCC GCGAGTTCAA AGACCTGCTC
GCGACCAATG ACGTCGGGCT GTTTTTCTTC GCCGGGCACG GCATGCAGAT CGACGGAACG
AACTACCTCC TCGCAACCGA CACGGACACC TCGTCGGAAC TCGACGCGAA GCACAGCTCG
CTTTCGCTCG ATAAGGTCAT CGACACGATG GCGAAGTCAC AGGCCTCGAT GAAGATCATG
ATTCTCGACG CCTGCCGTAA CAACCTGTGG GAGCGGGCTT GGCATCGCGA TGCATCGACG
CGGGGCTTGG CCTCGGTGTA CGCCCCGAAA GGCACGATCA TCGGCTTTGC GACCTCGCCC
GGCGAAGTCG CCGAAGACGG CACAGGTCGC AACGGTACCT ATACCGCCGC ACTGCTGCAG
CATATCGACA CGCCGGATTG CTCGATCGAG ACGATGTTCA AGCGGGTGCG GAACACCGTG
GCGGCCGAAA CGCGCGGGAA GCAGACATCC TGGGAGCACA CCTCGCTCTC GGGGGAGTTC
TATTTCAACA TGAGCCTCGG CCGTGTCATC CGGGAATATA AAGAAACTTC GCTCGCCGAC
GGCCTCTTCG TCATCGACAC GAGCAAGAAG TCACACCGGA TTATTCAAGG CCTGAAGAGC
CACAACTGGT ACACGCAGAA CGACGCCTTG GGGATGCTTG ATGCGGCATC GGCTTCGAAG
ATGGCGGATG ACAGCCTGTT CGTCGTGGGG CGCAACATCT ACCAAGCCGC CTGTGGTGGC
GCGAATGCGG CGATCCCTTT CGCCACGAAC TTCCTCACTG AGACGAGCGG CTATCCCCCG
GAGAAGCGCA AGGCGCTTCT GGATGGCATG TTGTTCGAGA TATTCTTCAA CCCGAAGGGG
GAGCTGCGAG AGGCGATCAA GGACGGCTAC TTCGACGAGC TCTTCGAGTT GCAGCGATAT
GCCGAGACCA AGGAGAGCTT CCGGTTCATC AGCGACGCGC TGCAGGCTGC CCGCGGCGAT
TTCTATGCGC TGCCGGGCAA GAACCGCGAG GTCGCCGTCA CTGTCGCGAC CAAGAAAATG
AAGGACGGTT ATAGGGTGGA GGCCGTGTTC GTGGACGGCG CCGATGTCTT GCGGGCGAAA
GACGAGGAAT GGGACGTGCC CGAGGCGGAG CGGTTCTATG AACGCAAGGA TCTGGACGCG
CTCGTCAGGC AGCTGTCGGC CGAGATGGTG GTCCCCGGCC GATCGCTCAA GGTGACGTTC
ACGCCCATTG CGGCGGCGAA CGCCGAGTTG CGGTTCCCGA CGGGGTGGAC GGTTCGCAAG
GCTTGA
|
|---|
| Protein sequence | MAALVIGNGA YRDCGVLKNP VNDADDMATK LRSYGFHVVS SADATRIDMD RRLREFKDLL
ATNDVGLFFF AGHGMQIDGT NYLLATDTDT SSELDAKHSS LSLDKVIDTM AKSQASMKIM
ILDACRNNLW ERAWHRDAST RGLASVYAPK GTIIGFATSP GEVAEDGTGR NGTYTAALLQ
HIDTPDCSIE TMFKRVRNTV AAETRGKQTS WEHTSLSGEF YFNMSLGRVI REYKETSLAD
GLFVIDTSKK SHRIIQGLKS HNWYTQNDAL GMLDAASASK MADDSLFVVG RNIYQAACGG
ANAAIPFATN FLTETSGYPP EKRKALLDGM LFEIFFNPKG ELREAIKDGY FDELFELQRY
AETKESFRFI SDALQAARGD FYALPGKNRE VAVTVATKKM KDGYRVEAVF VDGADVLRAK
DEEWDVPEAE RFYERKDLDA LVRQLSAEMV VPGRSLKVTF TPIAAANAEL RFPTGWTVRK
A
|
|---|
| |