Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0556 |
Symbol | |
ID | 5425025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 626952 |
End bp | 628814 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640879802 |
Product | HipA domain-containing protein |
Protein accession | YP_001415469 |
Protein GI | 154244511 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0889579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.841401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATACG CGAAAGTTAG AATTTTGCCC CTTCACCTCG TAGGCGAGAC CATCGACAAG ACCCGGAGCC ACTACCTGGC CGAGACAGGC CGGCTGGTGC AGCTCATGCG CGGTATCTAT GTCGATGCCG GGGATGATGC TGACGCGACA GTCACGCGGC ACGCTGTCCG CATTGCCCAC TATCTCTATC CACGAGCCTA CCTGTCCGGC GCAAGCGCCG TGCTGCTCGG CCCGACCCGC GATGGCCGCC TTTTCCTGAG CGGGCGACGC ATCCAGCGCA CCCGTCTGCG GTCGCTGGAA ATCATCCAGA ATGCTGCGCC TGAACATCCT TCGGTCGCGC CCGCCATTAT CGATGACGGT ATGGGCGAAT TCCGGATCGA CGTGTCCTCG ATCAGGCAGC GTTTCCTGGA GGCTTTCCGG ATCAGGAGCG AGCATGCCGC GGCGCTCGAC GAAACGATGC GGGAGCAAAT CGCGCAGCGT CTGATCGAGG AATATGGAAC GCCGCAGGGC GCTGCCGACG CGGTTTGGAC TCTTGCCCGC GAGAATCAAT GGTACCGCGA AGGCGAACAC GCCGAACGAT TTCTCCTGCG CCGGCCAGCC GCCGCGCCGG TGCGGAACGA GGCTGCGCTC GATCTTACGG TCGCATGGCA CGGCGCGCCG GTCGGGCAAC TGACCCATGA CGGCTTCGAG TGGCGCTGGC GCGATGAGGA CTGGCACGGT CCACCCCTGA TCCGGCAGAC GACCCCCGGC AAGCTGCCGC CCTTTATCGT CTCCCTGCTG CCGGAAGGCT GGCTTGAGTC CGTGCTTCAC GACCGCGACG AACGCGCGCT CCTGAAATCC GGCAGGCGCT ACATGTCGAA TATCACGATC GCCGAGCGCC CCAGCGAGCT TGCCAGCCTG CCGGCTGACG TCCTGACAAC GCCGCTGGCG CGCTATTCAG AGGACGGCGT CTTCACCGGG CGGTACGCCG GCCCCGGACG CGGCCCGATC GAAGAGAGCT TCGAACGCAA TCTGGCCGCG ATTTTCGCAA GCAGCGAAAC GCCGCGCCTT TCGGGCATCC AGATTAAAGC CCCGATGTTC CTCGGCCCGG ACGGCACCCT GACGGCCAGC ACAAAAGAGC CCTTCACGCA TATTCTCAAA CCCGCCGGCA CCAGTGGCTT TGAAATCCTC CCCGTGGTCG AATGGCAGGC GCTCGCCCTC GGCGCGGCGG CGGGCTTCGA GACGCCGGCC ATGGCGCTTG TCCCCATGCC GGACGGCATG CCCCCGGCGC TGCTCGTCGA GCGTTTCGAC ATCAGGAGCG GCGCCAACGA CACGCGCCTG CTGGCGCTGG AGGATTTCTG CTCGGTCCTC GGCCTGCCCA CCGAAGCCAA GTATGACGGG ACCATGGAGC GCGTCGCCCG CGCCGTGCGG CCGCTGTCAA CCGCACCTGA CGAAGACCTG CTCATCGTCT TCCGGCGCGC TCTGTTCGCG TGGCTGATCG CCGACGGCGA CATGCATCTC AAAAATCTGG CGCTCCTAAA GATCGCCGAA CCCGGAAGCG ACCATTTTAC AAGCGTCCGC ATGGCCCCGC TTTACGACGC GGTGACAACG CGCGTATTCC CGCGGCTGGC GCGCGACCGC ATGGCGCTCA AGCTCGCCGG CAAGGACGAC CGCCTGCGCC GATCCGAATT CAGGGCCTTT GCGGCGACAG CCGGCGTTAA GGCGGCGGCG GCCGACGAGG CCATCGACGA GATGACCCGC GCGCTCGGGG CTACTCTCGA CGCCGCCACC CTTCCGGCGC TGCTGACAAA CTCTCCGGTG GCGGTTGAAG CGGTCACCGA AATGCAGCGC CTTGTCAGGG AGCGCATCGA CAATCTGTCG TAA
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Protein sequence | MTYAKVRILP LHLVGETIDK TRSHYLAETG RLVQLMRGIY VDAGDDADAT VTRHAVRIAH YLYPRAYLSG ASAVLLGPTR DGRLFLSGRR IQRTRLRSLE IIQNAAPEHP SVAPAIIDDG MGEFRIDVSS IRQRFLEAFR IRSEHAAALD ETMREQIAQR LIEEYGTPQG AADAVWTLAR ENQWYREGEH AERFLLRRPA AAPVRNEAAL DLTVAWHGAP VGQLTHDGFE WRWRDEDWHG PPLIRQTTPG KLPPFIVSLL PEGWLESVLH DRDERALLKS GRRYMSNITI AERPSELASL PADVLTTPLA RYSEDGVFTG RYAGPGRGPI EESFERNLAA IFASSETPRL SGIQIKAPMF LGPDGTLTAS TKEPFTHILK PAGTSGFEIL PVVEWQALAL GAAAGFETPA MALVPMPDGM PPALLVERFD IRSGANDTRL LALEDFCSVL GLPTEAKYDG TMERVARAVR PLSTAPDEDL LIVFRRALFA WLIADGDMHL KNLALLKIAE PGSDHFTSVR MAPLYDAVTT RVFPRLARDR MALKLAGKDD RLRRSEFRAF AATAGVKAAA ADEAIDEMTR ALGATLDAAT LPALLTNSPV AVEAVTEMQR LVRERIDNLS
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