Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0458 |
Symbol | |
ID | 5421462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 500776 |
End bp | 501912 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879705 |
Product | ABC-2 type transporter |
Protein accession | YP_001415373 |
Protein GI | 154244415 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0334022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.108602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCGC TCACCGCCAC CGCCGGCTTC GCGAGGCGCG TCGGCGCCAT GATCGTCAAG GAGTTCATCC AGCTGCGGCG CGACCGGGTG ACGTTCGCCA CCATGATCAT GATCCCGCTG CTGCAGCTGA TCCTGTTCGG CTACGCCATC AACACCACAC CCCGACACCT GCCCACGGCG GTGTTCGCAC ACGAGAACAC GGACGCGAGC CGCGCCATCC TCGCCGCCTT GCGCAACACC GCCTTCTTCG ACTTCGTGAA GGAGGTCGGG AGCGCGGACG AGGCGGAGCA CATGATCCGC GCCGGCGAGG TGCTGTTTTT CGTGGAGATC CCGGCCGGCT TCGAGCGGGC GCTCAGGCGC GGCGACCAGC CGCAACTGCT GGTGGCGGCC GATGCCACCG ATCCGGTGGG CTCGGCCAAT GCGCTGGCGG CGCTGGCCGG GGTTGTCAGT TCGGCTCTGG TGCGCGAGCG GTTCGTTGAT GCGGCGGGCG ACATGCCGTT CGAGATCGTC CAGCACCGGC GCTACAATCC CGCCGGCACC AGCCAGCTGA ACATCGTGCC CGGCCTGCTG GGTACCATCC TCACCATGAC CATGCTGATC TATACCGCGC TGTCGGTGAC CCGGGAGACC GAGCGCGGCA CCATGGAGAG CCTCCTGTCC ATGCCGATCC ACCCGGTGGA GATCATGCTG GGCAAGATCA TCCCCTATGT GCTGGTGGGC ATCGTGCAGG CGATCCTGAT TCTCGGCTCG GGCATGGTGC TGTTCGGGGT GCCGCTGGAA GGCAGCGCCA TCTTCCTCGC GGCGGCGACG CTGCTCTTCA TCACCGCGAA CCTGTCCATC GGCTATACCT TCTCCACACT GGCGCAGAAC CAGCTCCAGG CGGTGCAGAT GTCCTTCATG TTCTTCCTGC CCTCGATTCT TCTGTCCGGC TTCATGTTCC CGTTTTCAGG CATGCCGGCA TGGGCGCAAT GGATCGGCGA GGGCCTGCCG CTCACCCATT ACCTGCGCAT GGTGCGGGGC ATTCTGCTGA AGGGATCAGG GTTTGGCGAC CTGAAGGTGG ATGCGGCGGC GCTTGTGGCG CTGATGTTGC TGGCCATGGG CATTGCCGTG GCGAGATTTC GTCAAACCCT TGACTGA
|
Protein sequence | MSALTATAGF ARRVGAMIVK EFIQLRRDRV TFATMIMIPL LQLILFGYAI NTTPRHLPTA VFAHENTDAS RAILAALRNT AFFDFVKEVG SADEAEHMIR AGEVLFFVEI PAGFERALRR GDQPQLLVAA DATDPVGSAN ALAALAGVVS SALVRERFVD AAGDMPFEIV QHRRYNPAGT SQLNIVPGLL GTILTMTMLI YTALSVTRET ERGTMESLLS MPIHPVEIML GKIIPYVLVG IVQAILILGS GMVLFGVPLE GSAIFLAAAT LLFITANLSI GYTFSTLAQN QLQAVQMSFM FFLPSILLSG FMFPFSGMPA WAQWIGEGLP LTHYLRMVRG ILLKGSGFGD LKVDAAALVA LMLLAMGIAV ARFRQTLD
|
| |