| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0452 |
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| Symbol | |
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| ID | 5421051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 494611 |
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| End bp | 496320 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640879699 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001415367 |
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| Protein GI | 154244409 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.384213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0840159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATCC CCCCGCTTTC CCCCGACCAG ACCCGCCTGC TGCACGACGG CTATCAGGCC
CAAATGCGCG GCCTTCTGGA TGACGCGGCC CGCCAGTATC GCAAGATCCT GAAGAAGGTG
CCGGACCATC CCGACGTCAT GCACCTTCTG GCCATGGTGC GCGCGCGCCA GCATCGCACC
GACGAGGCCA TCGCGCTCTA CCGCGCCGCC GCCGCGCTGA AGCCGCAGGA CGCCAAGCTC
TGGTATAATT TCGGCCTCGC CTGCACCGCC GTGGAACGCA ACCGCGAGGG TGCGGAGGCC
TTCGCCCGCG CCCTGGCGCT GGACCCCTCC CTCCCCGAGG GGATGGGCAT GCTGTTTTCG
GCCCGCCGCT CGGTCTGCGA CTGGCGGGAC GACGCTCAGC TTCTGGCGGC CATCGCCCGC
GCCGGGGACC CGGCGAGGCC GGAGATCCCG CCCTTCTTCA CCCTGTGGCT CGACGACCCG
GCGCTGCAGC TTGCCGCCGC GCGCCGCACC GTGGGCCGCC GCTGCGCCGG CATCGTTCCG
ACGCCGCTCC CCGCCCGCGC GCCAACCGAC GGACGGGTGC GCATCGGCTA CCTGTCGGCC
GATTTTCGCA ACCACCCGAC CACCCATCTG CTGGTCCGGC TGCTGGAGGT CCACGACCGC
TCGAAGTTCG AGATCACCGC CTTCTCCATC GGCCCGAACG ACGCCTCCCC GGCCCGCAAA
CGGGTGGAGG CAAGCGTCGA CCGCTTCATC GATTGCGAGC GGGAGCAGCC GCTTGAAACT
GCCGCACGCG CCCGCAGCCT CGGCATCGAC ATCCTGGTGG ATGTGATGGG CCACACCAAC
GGCAACCGCG TCGAGATCTT CGCCGCCCGC GCAGCGCCGG TTCAGGTGAG CTATCTGGGC
TATCCCGGCA CCAGCGGCGC CGATTTCATG GATTATGTGA TCGCCGACCC GTTCGTGCTG
CCGCTGGAAG ATGCCCGATT CTTCAGCGAG AAGGTGGTCC AGCTTCCCGA TACCTACCAG
CCCAATGACC CCACCCTCGC CCTCGCCGCG CGCCCCGGCC GGGCGGAATG CGGCCTGCCG
GACACCGGCT TCGTGTTCTG CGCCTTCAAC AATACGCGCA AGCTCGATCC CGCCACCTTC
GCCCTCTGGC TGCGCCTGCT GATGGAGGTG CCGGGCAGCG TGCTGTGGCT GCTGGCCGGC
GACGACGCCC GCGCCAATCT CAGGCGCGAA GCCGAGGCCG CAGGCGTCGC GCCTGAGCGA
CTCGTCTTCG CACCGCACCG CCCCCTGCCG GAGCATTTGG CCCGCATGGC GCTGGCGGAC
CTGTTCCTCG ACACCTTTCC CTACACCGCC CACACCACGG CCTCGGACGC GCTCCGGGTC
GGGCTGCCGC TGGTGACGCG GACCGGCCGC TCCTTCGCCT CGAAGGTCGC CGGCCGCCTG
CTGCAATTGT CCGGAGTGGG AGACCTCGTC ACCGACACGC CTGCCGCCTA CGAGGCGCTG
GCCCTGTCGC TGGCCCGCGA CCCGGCCCGG CTCGCCGCCC TCCGGGCAAG GCTCCAGGAC
AGCGCGGCGC GGGCTCGACT GTTTGACATC CAGCGCTACC GCGCTCAGAT CGAAGCGGCC
TATCTCGCCA TGATGGAGCG GGCCATGGCC GGCGCTGCGC CGGACCATAT CATCATCGCG
CCCTCCGCCG CCGAGGGCCC CGGCGCCTGA
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| Protein sequence | MSIPPLSPDQ TRLLHDGYQA QMRGLLDDAA RQYRKILKKV PDHPDVMHLL AMVRARQHRT
DEAIALYRAA AALKPQDAKL WYNFGLACTA VERNREGAEA FARALALDPS LPEGMGMLFS
ARRSVCDWRD DAQLLAAIAR AGDPARPEIP PFFTLWLDDP ALQLAAARRT VGRRCAGIVP
TPLPARAPTD GRVRIGYLSA DFRNHPTTHL LVRLLEVHDR SKFEITAFSI GPNDASPARK
RVEASVDRFI DCEREQPLET AARARSLGID ILVDVMGHTN GNRVEIFAAR AAPVQVSYLG
YPGTSGADFM DYVIADPFVL PLEDARFFSE KVVQLPDTYQ PNDPTLALAA RPGRAECGLP
DTGFVFCAFN NTRKLDPATF ALWLRLLMEV PGSVLWLLAG DDARANLRRE AEAAGVAPER
LVFAPHRPLP EHLARMALAD LFLDTFPYTA HTTASDALRV GLPLVTRTGR SFASKVAGRL
LQLSGVGDLV TDTPAAYEAL ALSLARDPAR LAALRARLQD SAARARLFDI QRYRAQIEAA
YLAMMERAMA GAAPDHIIIA PSAAEGPGA
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