| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0429 |
|---|
| Symbol | |
|---|
| ID | 5420818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 466677 |
|---|
| End bp | 467558 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640879676 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001415344 |
|---|
| Protein GI | 154244386 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.220728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCG AACTCGTCTT CCTGATCGAG CAAGTGCTCA ACGGGCTGCT GGTGGGCGTC
GCCTACCTGC TCATCGCGCT CGGTCTCTCG CTCATTTTCT CGCTGGGCGG CATCGTGAAC
CTCGCCCATG GCGGCTTCTA TGCCATCGGC GCCTATATCG GCGTGGAGAT CGGCAACCGC
TTCGGCTTTC CCGCCGCCTT CGTGGCGGCG CCGCTGTCGG TGGCGGTCAT CGGCATGGTG
GTGGAGCGCC TCTTGTTCTC GCGCTTCTAC CGGGCCGATC CCATCCTCTC GCTGCTGCTC
ACCTTCGGCC TCGCCATGGT GATCGAGCAG GCGCTGCGCA TGACCTTCGG CGCGACGCCC
ATTCCCTTCG CCATCCCGGA ATTCCTGAAG GGTCAGGTGT TCGTCGGCGA CTTCATCTAT
TCGCGCTACC GCATCACCAT TCTCCTGGTC GCCGCCGCGG CGGTGCTGGG GCTGTGGCTG
CTGCTCCAGC GCACCGCCTT CGGTCGGGTG GTGCGGGCCG GCGTGCAGAA CCCCGACATG
GTGGGCGCGC TCGGCATCTC GCTCCGGCCC TATCTCACGG CGGTGGCGGC CATCGGCATC
GGCCTTGCGG GGCTCGCCGG CATCATGCTC GCGCCCATCT CCGGCGTGCA TCCGGCCATG
GGCGCGGAGA TCCTCACCGC CGCCTTCGTG GTGGTGGTCA TCGGCGGGCT GGGCTCGTTC
TGGGGCGTGG TGCTGGCGGG ACTGCTGGTG GGGCTGGTGC GCGGGCTCAC GGTGTATTTC
ATCCCGCCGG CGGCCGAGGC CTCCATGTAT CTGCTGATGC TGATGGTGCT GCTGCTGAGG
CCGCGCGGTC TCTTCGGCGA GCGCATCCTG CGGTTCGAGT GA
|
|---|
| Protein sequence | MPLELVFLIE QVLNGLLVGV AYLLIALGLS LIFSLGGIVN LAHGGFYAIG AYIGVEIGNR
FGFPAAFVAA PLSVAVIGMV VERLLFSRFY RADPILSLLL TFGLAMVIEQ ALRMTFGATP
IPFAIPEFLK GQVFVGDFIY SRYRITILLV AAAAVLGLWL LLQRTAFGRV VRAGVQNPDM
VGALGISLRP YLTAVAAIGI GLAGLAGIML APISGVHPAM GAEILTAAFV VVVIGGLGSF
WGVVLAGLLV GLVRGLTVYF IPPAAEASMY LLMLMVLLLR PRGLFGERIL RFE
|
|---|
| |