Gene Xaut_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0428 
Symbol 
ID5421346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp464078 
End bp466669 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content69% 
IMG OID640879675 
ProductABC transporter related 
Protein accessionYP_001415343 
Protein GI154244385 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.222547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAGC CCCCCAACTC CGCCCTTCGC CCCGAACTGT CCGCCCGCTC GGGCAAAGGA 
GGCGCCATGC TCGCGCGCAA CGCCAATCTT CTGGTCGCCG CGGCAAGCCT CATCGCGCTG
CCGTCGGTCT TGTCCGCCCT CGGCCTGACG CTGACCTCCG CCAGCGACGT GGTGCTCCTC
GCCATGGCCT GCATGGCGCT GAACCTGCTC GTCGGCTACA CCGGCCTCGT CTCCTTCGGC
CATGGTGCAT GGTTCGGCCT CGGCGCCTAT GCGGCGGCCC TCATCCAGCA CCACCTCCTG
CCCGGATGGG GCGTGGTGCT GGCGCTGCCG GCGGCGCTGG TGGTGGCGCT CGCCGCCGTT
CCCATCGGCT TCGTGGTGCT GCGCCGGCGC GGCGTCTATT TCTCGCTGCT GACACTGGCC
TTTACCGCGC TGCTGTTTTC CGTCGCCTTC CGCTGGACCG CCGTGACCGG CGGCGAGAAC
GGCATCGGCG GTGTGCGGCG CGGAGCCCTC CTCGGCTTTG ACCTGGAGAC GGGGACGGCC
TTCTACGCCG TCGTCGCGGT GGTGATGTTC GTCGTGGTGT TCAAGCTGCA GCGCTTTGTG
CGCTCGCCCA TGGGCTCGGT GCTGGTGGCG ATCCGCGAGA ACGAGCAGCG CGCCCGCTTC
ATCGGCTACG ACACAAGGGC CTACAAGATC GCCTGCTTCA CCCTCTCGGC CGGCGTCGCG
GCGCTGGCTG GCGCGCTCAT GACCTTCAAC CATCGCTTCG CCTCGGCGGA CCCCATCGCG
GTGGCCTTCT CCGGCGAGCT TCTGGCCATG GTGGTCATCG GCGGCATGCG CAGCTTCCTC
GGGCCGGCCC TGGGTGCGCT GTTCTTCGTG CTGTTCCGCG AGTTCCTGTC CATGTGGACG
CCCAATTGGC TGTTCTATTT CGGCCTGCTG TTCATGGCCT TCATCGTCTA TTCCCCCACC
GGCCTCGTGG GGGTGGCGGG CCGCCTCATC GCGCCCCTGC GCAAAAAGAG CGAGGAAGCC
GCCGCTATGG GCCAGCGCAC CGGGGCGCGG GTCGCGGCCC TGCCCGCCGG CCTCACCGCC
CGCCCGCGCT GGGATAACCC GGAACCGGTG CTGGAGGCGA AGGGCCTTGT GCGCAGCTTC
GGCGGAATCA AGGCGGTGCG CGAGGGCGCG GTGGCGGTGA AGGACCGCAC GCTCCACGCC
CTGATCGGCC CCAACGGCGC CGGCAAGACC ACCACGTTCA ACATGATCTC CGGCATGTTC
CCGCCCAATG CGGGCGAGAT CCGCCTCGCC GGCGAGCGCA TAGACGGCCT CGCCCCGGAA
GCGGTGTGCA TGAAGGGGCT GTCGCGCTCG TTCCAGATCA CCAACCTCTT CCCCACCCTG
ACCGTGGAAG AAAACCTGCG GCTCGGCGTG CAGGCCACCC ACAAGAGCCG GCTTGATCCC
TGGCGGGATG CCGCCGCCAT TCCCGAGATC GTCGCCGAGA CCCGGGAGAT GATGGACTTC
CTCGGCGTCG CCGGCATGGA GAAGGCGGAG GCCGGCGCCC TCTCCTATGG CGGGCAGCGG
CTGCTCGACA TGGGGCTCGC CCTCACCTCT CGCCCGCGGG TGCTGCTGCT GGACGAGCCT
TTGGCCGGCC TTGCGGCCGC CGAGCGCACG CGGGTGTCCA ACCTCATCAA GCAGATCTCC
GCGCAGGTGC CGGTACTGCT GGTGGAGCAC GACATCGACC GGGTATTCGA GCTGGCCGAC
GCCGTCACCG TCATGGCTGA CGGCGCCGTG CTGGTGGACG GCACGGTGGA GGACGCGCGA
TCCAACAAGA AGGTGCAGGA GGTCTATATC GGCTCCGGCT CGGCGGCGCT GGCATCGCGG
GACCTTCAGT CCGCCGCCAC CGACACCCCC ATGCTCACGC TGGCGAAGGT GGATGCCTTC
TACGGCAAGA GCCGCATCCT CACCGATGTG TCGCTGGAGG CCAAGGAGGG CGAGATCCTC
GCGCTGCTCG GCCGCAACGG CGCCGGCAAG TCCACGTTGC TGAAGACCAT CACCGGCATC
GTGAAGCCGG CGTCCGGCTC CATCATGCTG GCGGGGGATG AACTCGCTGG CCTGTCATCC
GCCGCCATCG CCCGGCGCGG CGTCGGCTAC GTGCCGCAGG GCCGCGCGCT GTTCCATGGC
ATGAGCGTGC GCCACAACCT GGAACTGGGG CGGCTGAAGC GCATCACCGG GGCTGGCAGG
CACTTCTCCG AAGAAGAGGT GCTGGAGCTG TTCCCCCGCC TCAAGGTGCG CCTCGATACG
GCGGCGGACC TGCTCTCCGG CGGCGAGCAG CAGATGGTGG CGGTGGCCCG TGCCCTCATG
GGCGACACCC GCGTGCTGCT GCTGGACGAG CCGTTCGAGG GCCTGTCGCC TGCGGTGACG
GAAGAGCTGT TCGACGCCTT CGACCGGCTG CGCCAGTCGC TGACCCTCGT CATCGTGGAC
CACCATCTCG ACGTGGTGCT GAACCTGGCC GACCGGGCGG TGGTGCTGGA GCGCGGACAG
GTGATGCACG AAGGCCCCGC CCGGCCGCTC GCCCGCGACC TCGATTTGCG GCGGCAGGTG
CTGTGGCTGT GA
 
Protein sequence
MLQPPNSALR PELSARSGKG GAMLARNANL LVAAASLIAL PSVLSALGLT LTSASDVVLL 
AMACMALNLL VGYTGLVSFG HGAWFGLGAY AAALIQHHLL PGWGVVLALP AALVVALAAV
PIGFVVLRRR GVYFSLLTLA FTALLFSVAF RWTAVTGGEN GIGGVRRGAL LGFDLETGTA
FYAVVAVVMF VVVFKLQRFV RSPMGSVLVA IRENEQRARF IGYDTRAYKI ACFTLSAGVA
ALAGALMTFN HRFASADPIA VAFSGELLAM VVIGGMRSFL GPALGALFFV LFREFLSMWT
PNWLFYFGLL FMAFIVYSPT GLVGVAGRLI APLRKKSEEA AAMGQRTGAR VAALPAGLTA
RPRWDNPEPV LEAKGLVRSF GGIKAVREGA VAVKDRTLHA LIGPNGAGKT TTFNMISGMF
PPNAGEIRLA GERIDGLAPE AVCMKGLSRS FQITNLFPTL TVEENLRLGV QATHKSRLDP
WRDAAAIPEI VAETREMMDF LGVAGMEKAE AGALSYGGQR LLDMGLALTS RPRVLLLDEP
LAGLAAAERT RVSNLIKQIS AQVPVLLVEH DIDRVFELAD AVTVMADGAV LVDGTVEDAR
SNKKVQEVYI GSGSAALASR DLQSAATDTP MLTLAKVDAF YGKSRILTDV SLEAKEGEIL
ALLGRNGAGK STLLKTITGI VKPASGSIML AGDELAGLSS AAIARRGVGY VPQGRALFHG
MSVRHNLELG RLKRITGAGR HFSEEEVLEL FPRLKVRLDT AADLLSGGEQ QMVAVARALM
GDTRVLLLDE PFEGLSPAVT EELFDAFDRL RQSLTLVIVD HHLDVVLNLA DRAVVLERGQ
VMHEGPARPL ARDLDLRRQV LWL