| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0402 |
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| Symbol | |
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| ID | 5425176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 430597 |
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| End bp | 433197 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640879648 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001415317 |
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| Protein GI | 154244359 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.362695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACCTC TGGACCGGAA GCTGCTGAAC TGGCGGGCTG GCGCGGTGGC GGCGGCCATC
TTCGCAGCGG GCCTTGCGGC GACGTGGGCG GCCGGGGCGC TGGCGCGGCA CATCATCTTC
TCGAACACCC AGAGCCGGTT TTCCGCCGAT ACCGCCGAGA TGGCCGCCGC AGTGGGCGAG
CGGGTGCGCG CCCATGCCGA AGTGCTGGTG AGCATGCAGG GGCTCTATGC CTCGGTGGGG
CGCATCGATC GCGCCCAGTT CCAGCGCTAC GTGGACGTGC TGGATCTGGT GCGGCGCTAT
CCGGGCTTCG AGGCGCTCCA GGTGCTGCGC CATGTGACCC CGGACGGCCT CGACGCCTTT
GTCGCAGAGG TGCGCGCCGA TACCAGCGTC GATCCGCGCG GCCAACCCAA TTTCACCGTC
CATCCGGCCG GGCCGCGCCC GGTCTATAAC GTCATCCAGT TCGTGGAGCC CATGCGGGGC
AACGAGCGGG TGCTGGGCTT CGACGTGGGC TCGAACCCGG CGCAGCTCGA CAGCCTGGTG
CGCGGCGGCG ACACCGGGCG CATCGTCGCC ACGCCGCCGG TCAAGCTGAT CCAGGACGAG
AGTGGCGGGC TCGGCTTCAT CCTGCGCGCG CCGCTCTACA AGGCGGGGGA GCTGACCGCC
ACCGTGGAGC AGCGCCGCGC TGCCCTGCTG GGCTTTGCCG CCGCCGTCTA TCGCGCCAAC
GACCTCATGC GAGGGGTGCT CGACGCCCGC ACCCTCCAGC AGATGAACGT GCGGGTGCTC
GATCGCGGCT ATGCCCGGGT GTCAGCGGAG GGGGGGGTCA CCGCCGTGCC GGCGGACCCG
GCGGCCGCCG CCGTGCTGCT GTTCGACAGC CGCGAACCGA ACCTCCAGGT GGTGACGCCG
GTGGCGGAGG TGCCCATCGG CATCGCCGCC GAGCGATCTC TGGTGGTGGG CGACCGGCTG
TGGCTGCTCC ATTTCGCCGC GCGGGCGGGG TCGAGCTACG AGGCCGACCA GACCATTCCC
GCCGTGGTGC TGGCCAGCGG CTCGGTCATC AGCCTGCTGC TGGCGGGCAT GGCCTTGTCG
CTGATGCGCG CAGGCCGGCT GTCCCGCAGC CTCGGCACGC TCGATGCCGA GCAGCGGGCG
CTGGTGGAAA ATCCACTGGC CGGCATCCTG TTCACCCACG GGCGCGCGGT GTTGCGCGGC
AATCACCGCA TGGGGGAGCT GTGCGGCCGC CCACCGGAGG CCCTGGCCGG CCTCGACCTC
GCCGATCTCG CGGCGCGGCC GGAGGATGTT GCCGCCTTCG AGGCGGCGCT GGCCGCCATC
GCCGCCGGCG GAACCGCGGC GCTCGAACTG CACCTCGATT GTCCCGATCG CCCGCCCGTG
GTGGTGGATG CCTTCGGGCG TCCCCTGTTC CTCCAGGGGC GACGGGGCGA CGGGAACGTG
CTGTGGGTGA TGCAGGACAA GACCGACGCG CTCGCCGTTG AGGCCGAACG GCGCAGCCAC
GAGCGCGCGC TGCGCGAGGC CAATGCCGAT CTCACCCGGC TGGTCGATGC CGCCGAGGCC
CGCACCCGCG AGATCACCCT TCTCGCTGAG CTGAGCTCCC TCCTGCAATC CTGCCAGTCC
ACGGACGAGG TCTTCGCCTC GGTCCAGGCC TATGCGTCGC GGCTGTTTCC GGGCGAGGCG
GGCGCCCTCT ACGTGCTCAA TCGCAAGCGG GCGCAGGTGG TGCGCGGCGG CCGCTGGGGC
GCGCCGAAGG CCGATGTGGC CTCCTTCACC CCGGACGCCT GCTGGGCGTT GCGCCGGGGG
CAGGCCTTCC CAGTCTCCGA GGCGAGCCGG GGTCTCGTCT GCGATCATGT GGCGGGCGCC
GTCGGCGATG CCGGCGTGCC TGACCATGTG TGCCAGCCGC TGATCGCGCG CAACCGCCTG
CTGGGCTTGT TCTATCGCGA GCCGGCGGCG GAGGGGGCCA GCGCCTCGGC CCTCCAGCTT
TCCACCATGC TGGCCGAGCA GGTGTCCCTC GCCCTCGCCA ATATCGACCT GCGCGAGCAA
TTGCGCGGTC AGGCCCTGCG CGACCCCCTC ACCGGCCTCG GCAACCGGCG CTTTGTGGAG
GATGCGCTGG CCCTCCAGAT CGCCGGTGTC ACGGGGGATG GGCGGTCGCT GTCGGTGGCG
CTCATCGACC TCGACCATTT CAAGCAGGTC AACGACACCC ACAGCCACGA GGCGGGGGAC
GCGGTGTTGC GCGCCATCGG CGACGTGTTG CGTGCCAACA TCCGCAAGGG CGACATCATC
GCCCGCTACG GCGGCGAGGA GTTCCTGCTG CTGCTGCCCA ATACCGCGCC GGACGGGGCG
CTGGCGGTGG CGAACCACCT GCTCCAGGCG ATCCGCAGCC TGCGGGTGCT GTGGTCGGGC
GGGGTGCTGG AAGGCATCAC CGCGTCCATC GGCGTGGCGA CTTTCCCCGA TCACGTCAGC
CGGCCGGACG ACCTGATCGT CTCAGCCGAC GCGGCCCTCT ACCGCGCCAA GGCGCTGGGG
CGCGACCAGG TGGTGGGGAG CCCCGCCGCG CCCGATGCGG CGGGGCGGCC GGACCTGTCG
CCCCTGCATT CGGCGGAGTG A
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| Protein sequence | MGPLDRKLLN WRAGAVAAAI FAAGLAATWA AGALARHIIF SNTQSRFSAD TAEMAAAVGE
RVRAHAEVLV SMQGLYASVG RIDRAQFQRY VDVLDLVRRY PGFEALQVLR HVTPDGLDAF
VAEVRADTSV DPRGQPNFTV HPAGPRPVYN VIQFVEPMRG NERVLGFDVG SNPAQLDSLV
RGGDTGRIVA TPPVKLIQDE SGGLGFILRA PLYKAGELTA TVEQRRAALL GFAAAVYRAN
DLMRGVLDAR TLQQMNVRVL DRGYARVSAE GGVTAVPADP AAAAVLLFDS REPNLQVVTP
VAEVPIGIAA ERSLVVGDRL WLLHFAARAG SSYEADQTIP AVVLASGSVI SLLLAGMALS
LMRAGRLSRS LGTLDAEQRA LVENPLAGIL FTHGRAVLRG NHRMGELCGR PPEALAGLDL
ADLAARPEDV AAFEAALAAI AAGGTAALEL HLDCPDRPPV VVDAFGRPLF LQGRRGDGNV
LWVMQDKTDA LAVEAERRSH ERALREANAD LTRLVDAAEA RTREITLLAE LSSLLQSCQS
TDEVFASVQA YASRLFPGEA GALYVLNRKR AQVVRGGRWG APKADVASFT PDACWALRRG
QAFPVSEASR GLVCDHVAGA VGDAGVPDHV CQPLIARNRL LGLFYREPAA EGASASALQL
STMLAEQVSL ALANIDLREQ LRGQALRDPL TGLGNRRFVE DALALQIAGV TGDGRSLSVA
LIDLDHFKQV NDTHSHEAGD AVLRAIGDVL RANIRKGDII ARYGGEEFLL LLPNTAPDGA
LAVANHLLQA IRSLRVLWSG GVLEGITASI GVATFPDHVS RPDDLIVSAD AALYRAKALG
RDQVVGSPAA PDAAGRPDLS PLHSAE
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