Gene Xaut_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0393 
Symbol 
ID5423456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp421785 
End bp422726 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content71% 
IMG OID640879639 
Productarogenate dehydrogenase 
Protein accessionYP_001415308 
Protein GI154244350 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0833829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCC CGCTCGTTCC ACGCCTCGCC ATCATCGGGG CGGGGCTCAT CGGCTCGTCG 
CTGGCCCGCG CGGCACGGGA GAAGCATCTC GCCGGCACCA TCGTGGTGGC CGACGCCGAC
GCCACCGTCT GCGCCCGTGT GCGCGAGCTG GGCTTTGCCA ACGAGGTGAC CCAGAGCGCC
GCCGAGGCCG CAAAGGACGC CGACATCGTC ATCGCCTGCG TGCCCGTGGG CGCCTCCGGC
GCGGTGGCCG CCGAGGTGGG GCCGCATCTG AAGCCCGGCG CCATCCTCTC GGACGTGGGC
TCGGTGAAGG CTTCGGTGTT GGAGGCCATG GCCCCCTTCG TGCCGGCCCA TGCCCATCTG
GTGCCGGCCC ATCCCGTGGC GGGCACGGAG TTTTCCGGCC CCGACGCCGG CTTTGCCACC
CTGTTCGAGA ACCGCTGGTG CATCGTCACC CCGCCGGAGG GGGCCGATCC CGCCGCGGTG
GACCGCGTGG TCGCCCTGTG GCGGGCGGCG GGGGCGAACG TGGAGACCAT GAGCGCCCAG
CACCATGACC TGGTGCTCGC CATCACCAGC CATGTGCCGC ACCTCATCGC CTACAACATC
GTGGGCACGG CGGCCGAGCT GGAGGAGACG CTCACCTCCG AGGTGATCAA GTTCTCGGCC
GGTGGCTTCC GCGACTTCAC CCGCATCGCC TCGTCCGACC CCACCATGTG GCGCGACGTG
TTCCTCTCCA ACCGCGAGGC GGTCCTGGAG ATGCTCGGCC GTTTCACGGA GGATCTCACC
GCCCTCCAGC GCGCCATCCG CTATGGCGAC GGCGACGCCC TGTTCGAGCA TTTCACCCGC
ACCAGGGCCA TCCGCCGCTC CATCATCGAG CAGGGCCAGG AGACGGCCGC TCCCGATTTC
GGCCGCCGCG CCGCGGAAAA GCCCAAGCAC GAGCAGAGCT GA
 
Protein sequence
MIRPLVPRLA IIGAGLIGSS LARAAREKHL AGTIVVADAD ATVCARVREL GFANEVTQSA 
AEAAKDADIV IACVPVGASG AVAAEVGPHL KPGAILSDVG SVKASVLEAM APFVPAHAHL
VPAHPVAGTE FSGPDAGFAT LFENRWCIVT PPEGADPAAV DRVVALWRAA GANVETMSAQ
HHDLVLAITS HVPHLIAYNI VGTAAELEET LTSEVIKFSA GGFRDFTRIA SSDPTMWRDV
FLSNREAVLE MLGRFTEDLT ALQRAIRYGD GDALFEHFTR TRAIRRSIIE QGQETAAPDF
GRRAAEKPKH EQS