| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0319 |
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| Symbol | |
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| ID | 5424316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 327014 |
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| End bp | 330253 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879565 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001415234 |
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| Protein GI | 154244276 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.210711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCAAGTTCTT CATCGACCGT CCCATCTTCG CGGGCGTGCT GTCGGTCCTC
ATCTTCCTCG CCGGCCTCAT TTCCATGCGG GCCATGCCCA TTTCCGAATA TCCGGAAGTG
GTGCCGCCGC AAGTGGTGGT GCGCGCCACC TATGCCGGTG CCAACCCCAA GGTGATCGCC
GAGACCGTCT CGACGCCGCT GGAAGAGGCC ATCAACGGCG TCGAGGACAT GCTCTACATG
TCCAGCCAGG CTACCACCGA CGGCCTGATG ACGCTGACCG TCACCTTCAA GCTCGGCACC
GATCCGGACA AGGCGCAGCA ACTGGTGCAG AACCGCATCT CCCAGGCGGA ACCCCGCCTG
CCGGAAGAAG TGCGGCGCCT CGGCGTGACC ACAGTGAAGT CTTCGCCAGA CCTCACCATG
GTGGTTCACC TCATCTCCCC CAACAATCGC TACGACACCA CCTATCTGCG CAATTACGCG
GTGCTGAACG TGAAGGATCG CCTCGCCCGC ATCGAGGGCG TGGGGCAGGT TCAGCTGTTC
GGCGCCGGCG ATTATTCCAT GCGCATCTGG CTCGACCCGC AGAAGGTGGC CGAGCACGGG
CTTTCCGCCG CCGACGTGGT GCGCGAGATC CGCGCCCAGA ACGTGCAGGC GGCGGCCGGC
GTGGTGGGCG CTTCCCCCGG TGCTCCGGGG CTCGACCTGC AGCTGTCCAT CAACGCCCAG
GGCCGCCTCG CCAACGTGGA GGAGTTCGGC AACATCGTGG TGAAGAGCGG CACCAACGGC
GAGATCGTGC TGTTGAAGGA CGTGGCGCGG GTGGAACTGG GCGCCTCCGA TTATGCCCTG
CGCTCGCTGC TGAACAACAC CCAGGCGGTG GCCGTTCCCA TCTTCCAGGC CCCCGGCTCC
AACGCCATCC GCATCGCCGA CGAGGTGCGC CGGGTGATGG AGGAGATCAA GGCCAACATG
CCGGAAGGCG TGGATTATTC CATCGTCTAC GACACCACCC AGTTCGTCCG CGCCTCCATC
GACGCGGTGG TGCACACGCT TCTGGAAGCG GTGCTGCTGG TGGTGCTGGT GGTGATCGTG
TTCCTCCAGA CCTGGCGGGC CTCCATCATC CCGCTGCTGG CGGTGCCGGT GTCGATCGTC
GGCACGTTCG CGGTGATGCA CCTGTTCGGC TTTTCTATCA ATGCCTTGAC CCTGTTCGGA
CTGGTGCTCG CCATCGGCAT CGTGGTGGAT GACGCCATCG TGGTGGTGGA GAATGTGGAG
CGCAACATCG AGGGCGGCCT CTCCCCGCGT GAGGCCACCT ACAAGGCCAT GCAGGAGGTG
TCCGGACCGA TCATCGCCAT CGCCCTGGTG TTGATCGCCG TGTTCGTGCC GCTGGCCTTC
ATCACCGGGC TAACCGGCCA GTTCTACAAG CAATTCGCCC TCACCATCGC CATCTCGACG
GTGATCTCGG CGATCAATTC CCTCACCCTC TCCCCCGCCC TCTCGGCGCT GCTGCTGAAG
GGGCACGATG CGCCGAAAGA CCTTCTCACC CGCATCATGG ATGTATCTTT CGGCTGGTTT
TTCAAGGGCT TCAACAAGGC CTTCGTGAAG GGCTCCAACG CCTATGGCGG CGTGGTGAAG
CGCACCATCG CCCACAAGGT GATCATGCTG GGGCTCTACC TCGTTCTGGT GGCCATGACG
GCGGTGCTGT TCCGCGCCGT GCCGCCCGGC TTCGTGCCCG GGCAGGACAA GCAGTATCTC
GTTGGTTTCG CTCAACTTCC AGACGGCGCC ACGCTGGACC GGACGGAAGA GGTGATCCGC
CACATGAGCG ACATCGCCCT CAAGCAGGAG GGCGTGAAGT CGGCCATCGC CTTCCCCGGC
CTCTCCATCA ACGGGTTCAC GAACTCCTCC AACTCCGGCA TTGTTTTTGT CGGTTTGGAC
GAGTTCGAGG CGCGCAAGTC CCCGGCCCTG TCCGGAAACG CCATCGCCTT GGCACTGAAC
CAGAAATTCG CATCCATCCC GGATGCGATG ATCGCCATGT TCCCCCCACC CCCGGTCCAG
GGGCTCGGCA CCATCGGCGG GTTCAAGTTC CAGATCGAGG ATCGCGCCGG CCGCGGCTAC
GAGGCGCTCG ACGCGGCCAC CAAGGCCTTC CTCGCCAAGG CCGCCACCGC GCCGGAGCTG
GCCGGCCTGT TCTCCTCCTA CCAGGTGAAC GTGCCGCAGC TGTTCGCCGA CATCGACCGG
GTGAAGGCGC GCCAGCTGAA CGTGGCCGTA ACCGACGTGT TCGAGACCAT GCAGATCTAT
CTGGGCTCGG CCTATGTGAA CGACTTCAAC ACCTTTGGGC GCACCTACAC GGTGCGGGTG
CAGGCGGACG CCCCGTTCCG CGCCCGGCCC GAGGATGTGG GCACCCTGAA GGTGCGCTCG
GCCACCGGCG AGATGATCCA GCTCTCGGCG CTGCTCAAGG TGCGCTCGGC GGCGGGGCCG
GAGCGGGCCA TGCGCTACAA CGGCTTCCTC TCGGCGGATG TGAACGGCGG CGCCGCCCCC
GGCTTCTCCT CCGGCGAGGC TCAGGCGGCG GTGGAGCGCA TCGCGGCCGA GACGCTGCCC
AAGGGCTTCT CCTTCGAGTG GACCGAACTC ACCTACCAGG ACATCCTGGC CGGCAATTCG
GCGGTGTGGG TGTTCCCGCT GGCCATCTTC CTCGTGTTCC TGGTGCTGGC GGCCCAGTAT
GAAAGCCTGG TGCTGCCGCT CGCCATCATC ATGATCGTGC CCACGGGGCT GTTCGCGGCG
ATGACCGGGG TGTGGCTCGC CGGCGGGGAC AACAATGTCT TCACCCAGAT CGGCCTCGTG
GTGCTGGTGG GGCTCTCGGC CAAGAACGCC ATCCTGATCG TGGAGTTTGC CCGCGAGCTG
GAATTCGCCG GCCGCACCCC GGTTCAGGCC GCACTGGAGG CGAGCCGGCT GCGGTTGCGG
CCGATCCTGA TGACCTCGCT GGCCTTCATC ATGGGCGTGG TGCCGCTGGT CACCTCCATC
GGCGCCGGGG CGGAGATGCG CAACGCCATG GGCACGGCGG TGTTCGCCGG CATGATCGGC
GTGACCGCCT TCGGCATCTT CCTGACGCCG GTGTTCTACG TGATGCTGCG GGCGCTTGCG
GGCAACCGCC CCCTGACCCA GCACGGCCAC GGCACGTTGG CGCCGGACGC GCCTCACGGA
GCACCCCAAG GTGCGGGCCA CGGAACCGCA ACTCCTCCGG CACTTCAGCC GGGGGAGTGA
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| Protein sequence | MNLSKFFIDR PIFAGVLSVL IFLAGLISMR AMPISEYPEV VPPQVVVRAT YAGANPKVIA
ETVSTPLEEA INGVEDMLYM SSQATTDGLM TLTVTFKLGT DPDKAQQLVQ NRISQAEPRL
PEEVRRLGVT TVKSSPDLTM VVHLISPNNR YDTTYLRNYA VLNVKDRLAR IEGVGQVQLF
GAGDYSMRIW LDPQKVAEHG LSAADVVREI RAQNVQAAAG VVGASPGAPG LDLQLSINAQ
GRLANVEEFG NIVVKSGTNG EIVLLKDVAR VELGASDYAL RSLLNNTQAV AVPIFQAPGS
NAIRIADEVR RVMEEIKANM PEGVDYSIVY DTTQFVRASI DAVVHTLLEA VLLVVLVVIV
FLQTWRASII PLLAVPVSIV GTFAVMHLFG FSINALTLFG LVLAIGIVVD DAIVVVENVE
RNIEGGLSPR EATYKAMQEV SGPIIAIALV LIAVFVPLAF ITGLTGQFYK QFALTIAIST
VISAINSLTL SPALSALLLK GHDAPKDLLT RIMDVSFGWF FKGFNKAFVK GSNAYGGVVK
RTIAHKVIML GLYLVLVAMT AVLFRAVPPG FVPGQDKQYL VGFAQLPDGA TLDRTEEVIR
HMSDIALKQE GVKSAIAFPG LSINGFTNSS NSGIVFVGLD EFEARKSPAL SGNAIALALN
QKFASIPDAM IAMFPPPPVQ GLGTIGGFKF QIEDRAGRGY EALDAATKAF LAKAATAPEL
AGLFSSYQVN VPQLFADIDR VKARQLNVAV TDVFETMQIY LGSAYVNDFN TFGRTYTVRV
QADAPFRARP EDVGTLKVRS ATGEMIQLSA LLKVRSAAGP ERAMRYNGFL SADVNGGAAP
GFSSGEAQAA VERIAAETLP KGFSFEWTEL TYQDILAGNS AVWVFPLAIF LVFLVLAAQY
ESLVLPLAII MIVPTGLFAA MTGVWLAGGD NNVFTQIGLV VLVGLSAKNA ILIVEFAREL
EFAGRTPVQA ALEASRLRLR PILMTSLAFI MGVVPLVTSI GAGAEMRNAM GTAVFAGMIG
VTAFGIFLTP VFYVMLRALA GNRPLTQHGH GTLAPDAPHG APQGAGHGTA TPPALQPGE
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