Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0295 |
Symbol | nusA |
ID | 5424181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 302397 |
End bp | 303992 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640879541 |
Product | transcription elongation factor NusA |
Protein accession | YP_001415210 |
Protein GI | 154244252 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0917388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0106159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGCCG TCAGCGCAAA CCGGCTGGAA CTGCTGCAGA TCGCCGATGC GGTCGCGCGG GAAAAGTCCA TCGACCGCAG CATCGTGATT GCCGCCATGG AGGACGCCAT CGCCAAGGCC GCGCGCTCGC GCTACGGCCA GGAGACGGAC ATCCACGCCG ACATCAACGC CAAGACCGGC GAGCTGCGTC TGGCCCGCCA CCTGCTGGTG GTGGACGAGG TGGAGAACAC GGCCACCGAG ATCACCCTGG ACGGCGCCCG GCGCCACAAC CCGGCGGCGC AGGTGGGCGA CACCATCGCC GACACCCTGC CCCCGTTCGA TTTCGGCCGC ATCGCGGCCC AGTCGGCCAA GCAGGTCATC GTGCAGAAGG TGCGCGAGGC CGAGCGCGAC CGGCAGTATG ACGAATACAA GGACCGCATC GGCGACGTGG TGAACGGCCT CGTCAAGCGC GTCGAATACG GCAACGTGGT GGTGGACCTC GGCCGTGGCG AAGGCATCCT GCGCCGCGAC GAGCTTTTGC CGCGCGAGAC GGTGAAGACC GGCGACCGCA TCCGCGCTTA CGTCTACGAC GTGCGCCGCG AGCCGCGCGG GCCACAGATC TTCCTGTCGC GCACCCATCC CCAGTTCATG GCCAAGCTGT TCGCGCAGGA AGTGCCCGAG ATCTACGACG GCATCGTCGA GATCAAGGCG GTGGCGCGCG ATCCCGGCTC CCGCGCCAAG ATCGCGGTCA TCTCCCGCGA CCAGTCGGTG GACCCCGTCG GCGCCTGCGT CGGCATGCGC GGCTCGCGCG TGCAGGCGGT GGTGAACGAG CTGCAGGGCG AGAAGATCGA CATCATCCCC TGGAACCCGG ACATCGCCAC CTTCATCGTC AACGCCCTCG CCCCCGCCGA GGTGGTGAAG GTGGTGCTCG ACGAGGATCG CGAGCGCATC GAGGTGGTGG TGCCCGACGC CCAGCTGTCG CTGGCCATCG GCCGCCGCGG CCAGAACGTG CGCCTCGCCA CCCAGCTCAC CGGCTGGGAC ATCGACATCA TGACCGAGCA GGAGGAAAGC GAGCGGCGCC AGAAGGAATT CGCCGAGCGC ACCAAGATGT TCGCCGAGGC CCTCGATCTC GACGAGATGA TGGGCCAGCT GCTGACCTCC GAGGGCTTCA CCTCGGTGGA GGAGATTGCC TACGTCCAGC TCCAGGAGCT TGCCTCCATC GAGGGCTTCG ACGAGGACAC CGCCGCCGAG CTGCAGGCCC GTGCCCTGAA GCACCTCGCC GAGGTGGAAG AGGCGCTCGA CGCCCGCCGC ATCGAGCTGG GCGTGGACGA CGACCTGAAG AGCGTGCCCG GCGTCACCTC CAAGATGCTG GTCGCGTTCG GCGAGAACGA CATCAAGAGC GTCGAGGACC TGGCCGGCTG CGCCACCGAT GACCTCATCG GCTGGACCGA GCGCAAGGAC GGCGAGACCG TCCGCCACGC CGGCGCCCTC GATGGCTTCG AACTGTCCCG CGAGGACGCG GAGGCCCTGG TCATGCAGGC CCGCGTCGCC GCCGGCTGGA TCGAGGCAGA CGAACCCGCT GCGGATGGCG ATGACGCCGC CGCCGGCGAA GCCTGA
|
Protein sequence | MVAVSANRLE LLQIADAVAR EKSIDRSIVI AAMEDAIAKA ARSRYGQETD IHADINAKTG ELRLARHLLV VDEVENTATE ITLDGARRHN PAAQVGDTIA DTLPPFDFGR IAAQSAKQVI VQKVREAERD RQYDEYKDRI GDVVNGLVKR VEYGNVVVDL GRGEGILRRD ELLPRETVKT GDRIRAYVYD VRREPRGPQI FLSRTHPQFM AKLFAQEVPE IYDGIVEIKA VARDPGSRAK IAVISRDQSV DPVGACVGMR GSRVQAVVNE LQGEKIDIIP WNPDIATFIV NALAPAEVVK VVLDEDRERI EVVVPDAQLS LAIGRRGQNV RLATQLTGWD IDIMTEQEES ERRQKEFAER TKMFAEALDL DEMMGQLLTS EGFTSVEEIA YVQLQELASI EGFDEDTAAE LQARALKHLA EVEEALDARR IELGVDDDLK SVPGVTSKML VAFGENDIKS VEDLAGCATD DLIGWTERKD GETVRHAGAL DGFELSREDA EALVMQARVA AGWIEADEPA ADGDDAAAGE A
|
| |