Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0005 |
Symbol | |
ID | 5421965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 6258 |
End bp | 7142 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879250 |
Product | inner-membrane translocator |
Protein accession | YP_001414921 |
Protein GI | 154243963 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.901395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000431174 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCCCC TGACCCTTTC CTTTGCGGTC ATCAACGGAC TTCTGCTCGG CGGAATCTAC GGTGGCGTCG CCCTCGGGCT GAGCCTCATC TTCGGTGTCA TGCGCGTCAT CAATTTTGCG CACGGCTCGT TCCTGATGCT GGCCATGTAT TGCTCGTATC TTCTTTGGGC GAGCCTTGGG GTGCATCCCT ATGTCAGCAT CCTTGTCACC GTGCCGTTCC TGTTCGCCGT CGGCTATGTG GTGCAGAGCG TAGTCATCTC CCCGCTCATC CGGCGCGAGC GGGCGCTGGT GGTGGAACCC ACGAGCGCCC TGCTGCTCAC CGCCGGCGTC TATCTGGTGG TGGACAACAG CGTGCTCATG GCGTTCGGCC CGGACGTGCG CTCGGTGACC ACCGACATCA CCTATGAATC GATCTTCGTC GCCGGCCTGC CCATCAACAT GGCCCGGCTC ATCGGCTTTG CCGCCGCGAT CCTCGTGGCC TTCGCCCTGT CGTTCTGGCT CAAGCATTCG GACATGGGCC GCGCCATCCG CGCCACGGCG CAGAACCGGG ATGCGGCGGC CATGTCCGGC ATCAACGTGC CGCTGATCTA CAACGTCACC TTCGGCCTCG GCTGCGCCGT GCTCGGCCTG TTCGGGGCGC TGCTGGTGCC GTTCTTCTCC ATCACCCCCA CCATCGGCCT GTCGTTCGGC ATCAAGTCGT TCCTGGTGGT GGTGCTGGGC GGCATCGGCT CCATCCCCGG TTCGATCCTC GGCGGGCTGC TGCTCGGCGT GTTCGAATCC GTGGCCGCCC AGTTCGTCAC CGCCACCTCG GCGGCGATCT TCTCCTTCGG CCTGTTCATC GTGATCCTGC TCATGCGGCC TGCGGGCCTC ATGGGCCGAG CTTGA
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Protein sequence | MDPLTLSFAV INGLLLGGIY GGVALGLSLI FGVMRVINFA HGSFLMLAMY CSYLLWASLG VHPYVSILVT VPFLFAVGYV VQSVVISPLI RRERALVVEP TSALLLTAGV YLVVDNSVLM AFGPDVRSVT TDITYESIFV AGLPINMARL IGFAAAILVA FALSFWLKHS DMGRAIRATA QNRDAAAMSG INVPLIYNVT FGLGCAVLGL FGALLVPFFS ITPTIGLSFG IKSFLVVVLG GIGSIPGSIL GGLLLGVFES VAAQFVTATS AAIFSFGLFI VILLMRPAGL MGRA
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