| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 5421260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 330 |
|---|
| End bp | 1850 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640879246 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_001414917 |
|---|
| Protein GI | 154243959 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0129481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000143408 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGCG CGACGACCGC GACCACCCCT TGGGAGCGCG TCCGTCAGCG CCTGCGTGAA
GAGATCGGCG AGGAGAAGTT CACCAGCTGG TTCGCCCGTA TGGACCTCGA CAAGCTGACC
GCCGACGCGG TCCAGCTCTC CGTCCCCACG CGCTTCCTCA AGTCGTGGAT CCAGGAGAAT
TATCTGCCCC GCATCGCCGA CATCTGGGCC GAGGAGAGCG GCGCCAAGCG GCGCGTGGAC
CTTGCCGTGC GCAATGCGTT CGCCCGTCCC GTGGCGCTGA AGGCGAACAC GGTGCGCGAG
GTGGTGACCG AGCGCACCGA CATGCATTCC GGCGATACCC GCCAGCAGTC GGCCCGGATC
TCCGACGGGC GCTCCACCGA TGCCCGCGGT GCCGATGGAC GCGGCTCTGA TGCGCGGGCT
GTCGAGCCCC GTGCCGCGGC GGCCGCCCTG TCCGACGCGG TGGCAGGGGA CGTAGCGTCC
GGTTCCCCCC TCGACGCGCG CCTGACCTTC GAGACCTTCG TGGTGGGCAA GTCCAATTCG
CTGGCTTTCG CCGCCGCCAA GCAGGTGGCC GAGAGCGCCC CCGGCTCGGC GCCGGTGTTC
AACCCGCTCT ATCTCCATGC GGCCGTGGGC CTCGGCAAGA CGCACCTGTT GCAGGCCATC
GCCCGCGCCG GCGCGGTGGG CGGCCGGCGC ACCACTTACC TGACCGCCGA GCGCTTCATG
TATGGCTTCG TGGCCGCCCT GAAGACCCAT TCGGCCATTG CCTTCAAGGA TGCCCTGCGC
ACCATCGACA CGCTGGTGAT CGACGACCTG CAGTTCCTGA AGGGCAACAA TCTCCAGCAG
GAATTCTGCC ATACCCTCAA CGCCCTGCTG GACGGCGGGC GGCAGGTGGT GGTGGCGGCG
GACTGTCTGC CCGGCGAGCT GGAGCATCTC GACGAGCGGG TCCGCTCGCG CCTCGCCGGC
GGCCTGGTGG TGGAACTGGC CGCGCTGGAG GAGGACCTGC GCCTCGAGAT CCTCAAGGCC
CGCTACCAGA CCCTGACCGA GCAGCATCCG GGCTTCGCGG TGCCGGCGCC GGTGCTGGAG
TTCCTGGCGC GCAGCGTCGG CCAGAGTGGG CGCGACCTCG ATGGCGCGCT GAACAAGCTG
CTGGCCTTCA ACCAGCTCAC CGGCGAGCCG GTGACGCTGG AGATGGCGGA AAACGCGGTC
AAGGACCTCA TCCGCCCCAC CGATCCCAAG CGGGTGCGGG TGGACGACAT CCTGCGCGTG
GTGGCCAAGC ATTATAATGT GTCGCGCGCG GACCTGCTGT CCCAGCGCCG CACCGCCACC
GTGGTGAAGC CGCGCCAGAT CGCCATGTAT CTGGCCAAGA CCCTCACGCT GCGCTCGCTG
CCGGAAATCG GCCGCCGCTT TGGCGGTCGT GACCACACCA CCGTGCTGCA CGCGGTGCGT
AAGATCGACG GCCTCGTCAA CGCCGACCGG GCACTGGCCG AGGAAATCGA GGTGCTGAAG
CGCCTCGCGC TGGAGGCCTG A
|
|---|
| Protein sequence | MECATTATTP WERVRQRLRE EIGEEKFTSW FARMDLDKLT ADAVQLSVPT RFLKSWIQEN
YLPRIADIWA EESGAKRRVD LAVRNAFARP VALKANTVRE VVTERTDMHS GDTRQQSARI
SDGRSTDARG ADGRGSDARA VEPRAAAAAL SDAVAGDVAS GSPLDARLTF ETFVVGKSNS
LAFAAAKQVA ESAPGSAPVF NPLYLHAAVG LGKTHLLQAI ARAGAVGGRR TTYLTAERFM
YGFVAALKTH SAIAFKDALR TIDTLVIDDL QFLKGNNLQQ EFCHTLNALL DGGRQVVVAA
DCLPGELEHL DERVRSRLAG GLVVELAALE EDLRLEILKA RYQTLTEQHP GFAVPAPVLE
FLARSVGQSG RDLDGALNKL LAFNQLTGEP VTLEMAENAV KDLIRPTDPK RVRVDDILRV
VAKHYNVSRA DLLSQRRTAT VVKPRQIAMY LAKTLTLRSL PEIGRRFGGR DHTTVLHAVR
KIDGLVNADR ALAEEIEVLK RLALEA
|
|---|
| |