Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0680 |
Symbol | rplD |
ID | 2738266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | - |
Start bp | 656295 |
End bp | 656909 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637172861 |
Product | 50S ribosomal protein L4 |
Protein accession | NP_966444 |
Protein GI | 42520529 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0323983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATGTA ATTTAGTTAA TCTATCTAAT GATAATGTAG GTGCTGCTCA GCTCAATCCT TTGATATTTT CTGCTAAGCA AAAATTGAGT ATTTTGCATG ATATAGTGAG ATGGCAATTA GCGAAGAGAA GAGCTGGTAC TCATAAAACA AAAGGTATTA GTGATGTCTC TGGTACAACA GCTAAACCTT ATGGTCAAAA ACGTACCGGT AGGGCAAGAC AAGGGAGCTT GCGATCTCCT CAATTTAGAG GTGGTGGGAT TATTTTCGGC CCTGTTGTGA GGAGTCATAC TTATTCTCTT AATAAGAAGG TACGCAAATT TGGTTTAAAA ATTGCTTTAT CTCTAAAGTA TTTAAATAAT CAAGTAATTA TTCTGGATAA TTTAAATATT GATGTGAAGA AAACGTCTGA AATGTGTAAA TGTATTAAAA ATTTTAAATT TTCTTCCTTT TTGATAGTTG GTGATTATGG AGATGATTTG TTGCGTGCGG CTAAAAACTT GCACTATGTA GACTTAATCA AACCTATTGG GTTAAATGTT TTTGATATAT TGAATCACGA ATGCGTGATG TTGACAAAGG ATACTTTAAA GCATCTTGAA GGTAGATTGT TATGA
|
Protein sequence | MECNLVNLSN DNVGAAQLNP LIFSAKQKLS ILHDIVRWQL AKRRAGTHKT KGISDVSGTT AKPYGQKRTG RARQGSLRSP QFRGGGIIFG PVVRSHTYSL NKKVRKFGLK IALSLKYLNN QVIILDNLNI DVKKTSEMCK CIKNFKFSSF LIVGDYGDDL LRAAKNLHYV DLIKPIGLNV FDILNHECVM LTKDTLKHLE GRLL
|
| |