Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0658 |
Symbol | rpoA |
ID | 2737904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | - |
Start bp | 645213 |
End bp | 646280 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637172839 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | NP_966422 |
Protein GI | 42520507 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.535556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTATA ATAATGATGT TTCTCTCTGT AGCAATTTAG ATAAATTGAT TAAACCTAGT TCAGTTAAGG TAGTATCAGA TGATTCAAGT GAAAAAAGTG ATATAGTGCT AGAACCGTTG GAAAGTGGTT TTGCTTTAAC ATTAGGCAAT GCATTAAGAC GTGTAATGTT ATCTTCTCTT AAAGGTAGTG CTGTTTATGG AATAAAAATT GAAGGTGTAA CTCATGAGTT CACTTCAATT CAAGGGGTGA GAGAAGACGT AACTGATATA GTATTAAATA TGGGTATGTT GAGGTGTAAA TTAAATGGTG CTTCTAATAA ATGCTTAAAT TTAAACGCTA AAGGGCCTTG CCAGGTATTA GCTGGGATGA TAGAAACTGA TGATCAATGC TCTATTGTTA ATAAAGATTT GTTAATATGT ACGCTGGGGC AAAATGTGGA GCTTAACATG ACCATATATG TGGCTAGCGG AAAAGGTTAT CTTCCTGTAA CTAAATATAA AGAAAATGAA CTTTTGAAGC TTATGAGTGA ACAGGATTTA ATTGGTTTTA TTCCAGTTAA TGCTTTGTAT AGCCCTGTCA ACAGGGTTTC GTACAGGGTA GAGAACAGTC GTGTTGGCCA AGTGACTGAT AAGGATAAGC TGATATTGTC AATTGAAACT GATGGTACAA TTTCTCCGAG TCAAGCTGTT GACTCTGCTG CAAGAATATT ACAGGAGCAA CTTCAGCCCT TTATTAGTTC TGATGTAAGT TATAAAAAAT CGCAGGTTTC TTCGTCTAGT GGTGCTAAAG ATTTGGGTTA TGACCCTGTC TTATTGCGTA AGGTAGATGA AATGGAATTA TCTGTCAGGT CTCATAACTG TCTGAAAAAC GAAAACATCA CTTATATAGG TGATCTTGTA CAAAAGACAG AAGGTGAAAT GTTAAGAACT GCTAATTTTG GCAGAAAGTC TTTGAATGAG ATTAAGGCAG TTTTGACTAA TTTTGGCTTG TCTTTGGGTA TGAATGTGCT AAACTGGCCA CCTAAGGATA TAGATGAGTT GGCTAAACAA CATACTGATG AAGATTAG
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Protein sequence | MYYNNDVSLC SNLDKLIKPS SVKVVSDDSS EKSDIVLEPL ESGFALTLGN ALRRVMLSSL KGSAVYGIKI EGVTHEFTSI QGVREDVTDI VLNMGMLRCK LNGASNKCLN LNAKGPCQVL AGMIETDDQC SIVNKDLLIC TLGQNVELNM TIYVASGKGY LPVTKYKENE LLKLMSEQDL IGFIPVNALY SPVNRVSYRV ENSRVGQVTD KDKLILSIET DGTISPSQAV DSAARILQEQ LQPFISSDVS YKKSQVSSSS GAKDLGYDPV LLRKVDEMEL SVRSHNCLKN ENITYIGDLV QKTEGEMLRT ANFGRKSLNE IKAVLTNFGL SLGMNVLNWP PKDIDELAKQ HTDED
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