Gene WD0560 details

Gene Information

• Locus tag: WD0560
• Symbol: nuoD
• ID: 2738075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 545825
• End bp: 546997
• Gene Length: 1173 bp
• Protein Length: 390 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637172750
• Product: NADH dehydrogenase subunit D
• Protein accession: NP_966333
• Protein GI: 42520418
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
• TIGRFAM ID: [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGATC TAAAGACAAT GATGTTAAAT TTTGGACCTC AGCACCCAGC TGCACATGGA 
GTGTTGCGTC TTGTTTTAGA GATGGATGGT GAAGTGATCG AGAGGGCAGA TCCCCATATT 
GGGCTTTTGC ACCGCGGTAC TGAAAAATTA ATAGAACATA AAACGTATCT TCAAGCTTTG 
CCTTATTTTG ATCGCCTTGA TTACGTATCA CCAATGTCAC AAGAGCATGC ATATTCACTT 
TGTGTGGAGA AATTGTTGCA ATGTGAAGTG CCAATTAGGG CAAAGTATTT ACGTGTCTTG 
TTTTGTGAAC TGACGAGAAT ACTAAATCAT TTACTGAACG TTTCTTCTCA AGCACTTGAT 
GTTGGAGCAA TGACCCCTCT TTTATGGCTC TTTGAAGAAA GAGAAAAAAT ACTGGAATTT 
TACGAAAGAG CTTCAGGTGC AAGGTTTCAC GCAGCTTACA TCAGGCCAGG TGGAATTGCA 
GCAGATGTTC CAGAAGATTT GATTGAGGAT ATTGCAAAGT TTATAGAGCA ATTTCCAAAA 
TATATAGACG ATGTTGATGA ACTTTTAACA GAAAATAGGA TATGGAAGCA ACGCACTGTA 
GGAATTAGTG AAATATCAAT TAAACAGGCA CTTGATTGGG GCTTTAGTGG CCCAATGTTG 
CGCGCTGCTG GGCTTGCTTG GGATTTGCGA AAAAGCCAGC CATATGAGAT ATATGATCAA 
CTAGATTTTG ATATACCGAT CGGCCAAAAT GGCGACTGTT ATGACCGTTA TCTAGTTAGA 
ATGGCAGAGA TTAGGCAATC TATCAGTTTG GTGAAGCAGT GCATAGAGAA AATGCCTGAA 
GGGCAAATAA AAACTGAAGA TAGAAAAATT TCTCCACCGT CAAGAGCAGA GATGAAAAAA 
TCTATGGAAG CTCTGATTCA CCATTTTAAG CTCTATTCAG AAGGATATCA CGTACCAGAA 
GGTGAGGCTT ACGCAGTTGT TGAGGCACCA AAAGGTGAGT TTGGAGTGTA TATAGTTTCA 
GATGGTACCA ATAGACCTTA TAGGTGCCGA ATAAGAGCAC CTGGCTTTGC GCATTTACAA 
GCCTTAGACT TTATGGCAAA AGGACACATG CTTGCTGACG TTGCAGCAAT TATTGGCTCA 
CTCGATATAG TTTTTGGTGA GATTGATAGG TAA 

 

Protein sequence

MPDLKTMMLN FGPQHPAAHG VLRLVLEMDG EVIERADPHI GLLHRGTEKL IEHKTYLQAL 
PYFDRLDYVS PMSQEHAYSL CVEKLLQCEV PIRAKYLRVL FCELTRILNH LLNVSSQALD 
VGAMTPLLWL FEEREKILEF YERASGARFH AAYIRPGGIA ADVPEDLIED IAKFIEQFPK 
YIDDVDELLT ENRIWKQRTV GISEISIKQA LDWGFSGPML RAAGLAWDLR KSQPYEIYDQ 
LDFDIPIGQN GDCYDRYLVR MAEIRQSISL VKQCIEKMPE GQIKTEDRKI SPPSRAEMKK 
SMEALIHHFK LYSEGYHVPE GEAYAVVEAP KGEFGVYIVS DGTNRPYRCR IRAPGFAHLQ 
ALDFMAKGHM LADVAAIIGS LDIVFGEIDR