| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0237 |
|---|
| Symbol | |
|---|
| ID | 2738221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 224122 |
|---|
| End bp | 225831 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637172459 |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | NP_966047 |
|---|
| Protein GI | 42520132 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.182056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG CAAAAAGTTT AATTTTGGCA GCTATCCTTT CCATGTTAAT CATGGTGTCT
TGGCGTATTA TTTATGATAA TTTTTTTAGT ACAAGCCAAA ACCAGCCATT GATTGAAAAT
ATTGAACATA TCGAATCTTT TAACGACCTT GCTCCTATAA TATACCAAAA TCGTTCTGAA
ATTATTAATT CTACTCGAGA ACAGAGGGTT AGTTTAACCA ATAACATGAT TAAAGGATCA
ATTTCTCTGA AAGGTGCAAG GTTTGATGAC TTAATTTTAA CTAATTACCA CTTAGAACCG
AGTTCTTCTT CTCCACAAGT GGTGTTACTG TCACCTGCAG AATCAAAAGA TGTATATTTT
GCAGAATTTG GGTGGCTCGA TCCGAGTAAC AAGATTAAAG TTCCAGATTC TAAAGCAGTC
TGGCGAGCAG ATAAACTTAA TCAAAAAGAG GTCAATTTAT CTTGGGACAA TGAGAATGGC
ATTTTATTTA GAATGAAAAT TAACCTCGAC GATAATTACA TGTTTAAAGT TGAGCAAGTT
GTTGAAAATA ATACAAAGGA TAATGTAGTT TTGGTTCCTT ATGGTAAAAT TAACCGTAAA
CGTGACAATA TCAACGAATC TTATTGGATA TCCCATGAAG GAGTACTGGG TGCATTTGAT
AATAAACTAG AGGAGTGGAC ATATAAGGAT ATTTCCAAAA AACATTTAAT AAAAGCAAGC
ACGAGTGAAA AAAATTGGTT TGGTTTTGCT GATAAATACT GGCTCACAGC CATCATACCT
GAAAAATCTG ATAAAATAAA TGTAAGCATT AAACACACAA ACGTTAATAA TACTGATAAA
TTCCAAGTAG ATTTTGTCAA ACCTTACAAG AGCATACTTC CTGGTGCAAG CGTTTCTAAT
GTGAATTATT TTTTTGCTGG AGCAAAAAAG TTGAATTTAC TGGATTCTTA TAAGGACACT
CTCAATATAC CCCTGTTTGA TAAAGCTGTA GATTTTGGTG TTCTTTACTT TATAACTAAA
CCAGTGTTTT TACTGCTTGA ATATTTTAAC TTCGTTTTAA AAAATTTTGG CTTAGCAATA
TTATTGCTGA CTTTAGTAAT CAAACTTTTG ATGCTTTCTT TATTTAATAG ATCATATATT
TCGATGTTTA AGGTAAAAAG CCTGCAGCCT GAATTAACTC GTATAAAAGA GTTGTATAAA
AATGACAGCT TAAAGCAGCA TAAAGAGACA ATTGCATTGT TTAAGAGAAA CAACGTAAAT
CCAATGTCGA GCATTTTTCC CATGCTAATA CAAATACCGG TATTTTTTGC TCTATATAAA
GTATTATTTG TTACTATAGA GATGAGGCAT GCTCCTTTTT TTTTATGGAT TAAGGATCTT
TCAGCTCCTG ACCCAACGAA CATCTTTACA TTATTTGGGT TGTTTAATTA TAACTTTCCT
ATTTCTATAG GCATTTTACC TATAATTTTC GGTGCCACCA TGATAATTCA GCAGAAGCTA
AGTGAGAAAG ATCAAACCAG TAAAGATGAT ATTCAAGTAA ATGTTATGAA GTTTTTACCT
TACATTTCTG TCTTTATTTT TTCTTCTTTT CCTGCCGGCC TGGTAATATA TTGGATATTT
AGTAATATTA TAACTCTAAT TCAACAGTCA TTAATAAAGT TGTTTTTAAC AAAAAAAGTG
GTAGTAAATG TCGAGAATAC TAATAGTTAA
|
|---|
| Protein sequence | MSEAKSLILA AILSMLIMVS WRIIYDNFFS TSQNQPLIEN IEHIESFNDL APIIYQNRSE
IINSTREQRV SLTNNMIKGS ISLKGARFDD LILTNYHLEP SSSSPQVVLL SPAESKDVYF
AEFGWLDPSN KIKVPDSKAV WRADKLNQKE VNLSWDNENG ILFRMKINLD DNYMFKVEQV
VENNTKDNVV LVPYGKINRK RDNINESYWI SHEGVLGAFD NKLEEWTYKD ISKKHLIKAS
TSEKNWFGFA DKYWLTAIIP EKSDKINVSI KHTNVNNTDK FQVDFVKPYK SILPGASVSN
VNYFFAGAKK LNLLDSYKDT LNIPLFDKAV DFGVLYFITK PVFLLLEYFN FVLKNFGLAI
LLLTLVIKLL MLSLFNRSYI SMFKVKSLQP ELTRIKELYK NDSLKQHKET IALFKRNNVN
PMSSIFPMLI QIPVFFALYK VLFVTIEMRH APFFLWIKDL SAPDPTNIFT LFGLFNYNFP
ISIGILPIIF GATMIIQQKL SEKDQTSKDD IQVNVMKFLP YISVFIFSSF PAGLVIYWIF
SNIITLIQQS LIKLFLTKKV VVNVENTNS
|
|---|
| |