Gene Veis_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4955 
Symbol 
ID4692971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5481099 
End bp5482373 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content66% 
IMG OID639852691 
ProductTetR family transcriptional regulator 
Protein accessionYP_999660 
Protein GI121611853 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.868884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTC ACCGTCCCAT CTCCATACGT CCGACCATGA ATTTCCCATC AGCCGAAGCC 
GGCGATCGCA TGACGGGTCG CTACAAGCAA AAGCGCGAAG CCATCCTGAA CGCGGCGGCC
CGGCTGTTCG ACGAGAACGG CATCAAGGGC ACCATGCTGT CCGAGGTCGC GCAGCAGGTC
GGGCTCAACA CCAACAGCAT CACCTACTAC TTCAAGAAGA AGGAAGACCT GGTGTTCGAG
TGCCTGATGC ACACCACGAA CACGATTTCC GCGCTCGCGG CCGACAGCGA CACCGCCGCC
ACGCCAGAGG AGCGCGTGAC GCGCTTCGTG ACCGGCCGTT GGAAGAAACT GGCCGAGGCC
GCCCAGGGCC AGTACCCGGC CACGATGTCG TTCCGCGACG TGGGCGAGCT CGACGCCTCC
TATACCAAGA TCATCTTCTC GGCCTATGGC GACATGTTCC GGCGCGTGCG CGGACTGCTG
GCCACCGGCC CGGTCACGTC GGACAACCGC ATGTCGCTGA CGATCCGCAC GCATCTGCTG
CTGACATCCA CGCAATGGGC GCGCACCTGG CTGTCGAACT TCAGCGTGGC CGACTACGAG
CGCCTGGCCG CGTACATGTG CGACGTGCTG ATCAACGGCC TGGCCGCGCC CGGCAAGCCC
TGGGGGCCGA CAGCGCTGGA CCGGAAGGTG GCCTCCATCA AACTGCCCGA GCCCTCGAAC
CACGGCTTCC TGGCCGCTGC CATCAGCCTG CTGAACGAGG TGGGCTACAA CGGCGCGTCC
ATCGACCGCA TATCGGCGCG CCTGTCCGTG ACCAAAGGCT CGTTCTACCA CCACATCCCG
AGCAAGGACG ACCTGTTCGC CGAATGCGTG AGCCGCACGC TGGCCGTGGT CGAGGGCATG
CAGGCCGCCG CCATCGCCGG CGAAGGCTCG GGCGGCGACA AACTGGCCGC GCTGGCGCGT
TCGCTGGTGG GCTACCACTT CTCGCCACGC GGGCCGCTGC TGCGCATGAC GGCCTGGACC
GAGCTGTCCA ACCTGGAACA GTTCTCCGGT CAGGTCCAGC CCATACGCCA GTTGACGCAG
ACCGTGGTCG ACTTTCTGGC CACCGGCATG ATGGACGGCT CGGTGCGCCC CACGCACCAG
GCGATCGCGG CCTGGATGGT CGTGGGCGCG ATCAACGGCT CGACCACGCT GGACAAGTGG
GTGCCCGGGT CCGAAAAGAC CGACGCGGTT GCGCTGTACC TGAAGCCCTT CTTCCATGGG
ATCTGCTCCG ACTGA
 
Protein sequence
MPSHRPISIR PTMNFPSAEA GDRMTGRYKQ KREAILNAAA RLFDENGIKG TMLSEVAQQV 
GLNTNSITYY FKKKEDLVFE CLMHTTNTIS ALAADSDTAA TPEERVTRFV TGRWKKLAEA
AQGQYPATMS FRDVGELDAS YTKIIFSAYG DMFRRVRGLL ATGPVTSDNR MSLTIRTHLL
LTSTQWARTW LSNFSVADYE RLAAYMCDVL INGLAAPGKP WGPTALDRKV ASIKLPEPSN
HGFLAAAISL LNEVGYNGAS IDRISARLSV TKGSFYHHIP SKDDLFAECV SRTLAVVEGM
QAAAIAGEGS GGDKLAALAR SLVGYHFSPR GPLLRMTAWT ELSNLEQFSG QVQPIRQLTQ
TVVDFLATGM MDGSVRPTHQ AIAAWMVVGA INGSTTLDKW VPGSEKTDAV ALYLKPFFHG
ICSD