| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4870 |
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| Symbol | truA |
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| ID | 4693926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5383588 |
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| End bp | 5384406 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639852608 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_999578 |
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| Protein GI | 121611771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.440295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATGG CTCTGGGTAT CAGCTACAAC GGCCAGGCTT ACTGCGGCTG GCAGAGTCAG
CCTTCGGTGC GCACCGTTCA GGACGCACTC GAAGCGGCCC TGGGCCGTTT CGCCACGCAC
CCCGTCAGCA CCCTGTGCGC CGGTCGCACC GACGCGGGGG TGCATGGGCT GATGCAGGTG
GTGCACTTCG ATACCCCGCT CGATCGTCCC GCCGCGTCTT GGGTGCGCGG CACCAACGGC
TTTTTGCCGG CAGACATTGC CGTGCAGTGG GCGCAAGCGG TGCCCGACAG CTTCCACGCC
CGCGCCAGCG CCCTGGCCCG GCGCTATGCC TATGTGCTGC TGCAATCGCC CGTGCGGCCC
AGCGTGGAGT CCGGGCGCGT GGGTTGGGTG TGCCACCGGC TCGACCACGA CGCGATGCAG
CAGGCCGCAG ACTACCTGGT CGGCGAGCAT GACTTCAGCG CCTTTCGGGC CTCGACCTGT
CAGGCGCCAT CCCCGGTCAA AACACTGCGG CGCATCGGCA TCTCGTGCCG TGGCCAAAGC
CCGCCCCACC CGGCGCTGGG CTGGAGCCCC TGCTACTGGC GCTTCGAGTT TGTCGCCAAC
GCCTTTTTGC ACCACATGAT CCGCAACATC ATGGGTTGCC TGGTCGCCAT CGGCCAGGGC
AAGCAGTCGC CGCAATGGAT GCAGCAACTG CTGCGCGCCC GGTCGCGCGC CGCTGCGGCG
CCTACCTTTG CTCCGGATGG GCTGTATTTT CTGGGGCCGG TCTACGCTGC CGGTTGGGGC
CTGCCCGAGC GCACGGTTGC TTTTGACGGT TGGCCATGA
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| Protein sequence | MRMALGISYN GQAYCGWQSQ PSVRTVQDAL EAALGRFATH PVSTLCAGRT DAGVHGLMQV
VHFDTPLDRP AASWVRGTNG FLPADIAVQW AQAVPDSFHA RASALARRYA YVLLQSPVRP
SVESGRVGWV CHRLDHDAMQ QAADYLVGEH DFSAFRASTC QAPSPVKTLR RIGISCRGQS
PPHPALGWSP CYWRFEFVAN AFLHHMIRNI MGCLVAIGQG KQSPQWMQQL LRARSRAAAA
PTFAPDGLYF LGPVYAAGWG LPERTVAFDG WP
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