| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4816 |
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| Symbol | |
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| ID | 4691349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5318998 |
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| End bp | 5320011 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639852556 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_999526 |
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| Protein GI | 121611719 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.244366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG CGCGCCGCAC CCTTCTTCGC AGCACAGCGG CTGTCGTAGC GCTACCCGGC
GTCATCGAGC GCGCCTTCGC CCAAAAGGCC GAGTTCACAT ACAAGTACGC GAACAATCTG
CCGGCGACCC ATCCGATGAA CCTGCGCGCC AAGGAGATGG CGGCGGCCGT CCTGGCAGAA
AGCAAGGGGC GCGTCGACAT TCAAGTCTTC CCGGCCAATC AGTTGGGCAA CGACACCGAT
ATGCTGAGCC AGTTGCGTGC CGGCGGCATC GAGTTTTTCA CCTTGTCGGG GCTGATTTTG
TCCACCCTGG TGCCCGGTGC GGCCATTACC GGGCTGGGTT TCATCTTTGC CGATTACGAC
AGCGTCTGGA AGGCGCTGGA CGGCGAGCTT GGCGGCCATG TCCGCAAGGA GATCGGCAAG
TCTGGCCTGG TGGTGATGGA GCATATCTGG GACAACGGGT TCCGCCAGAT CACCTCGTCG
GGCAAGCCCA TCCACAGCGC CGATGACCTC AAGGGCTTCA AGATCCGGGT GCCGGTCTCG
CCGATGTGGA CTTCGCTGTT CAAAGCCTTC GATTCGTCCC CGGCCTCGAT CAACTTCGCC
GAGGTGTACT CGGCCTTGCA GACCAAGGTG GTCGATGGGC AGGAGAACCC GCTGGCGGTC
ATCGAGACCG CCAAGCTCTA CGAGGTGCAG AAATACTGCT CGATGACCAA CCACATGTGG
GATGGCTTCT GGTTCCTGGC CAACCGCCGT GCCTGGGAGC GCCTGCCGGA CGAGTTGCGG
GCCCTGCTTG CCAGGCACAT CGATGGGGCG GCCCTCAAGC AGCGGGCCGA TGTCGCGGCG
CTGAACGCGA GACTGCAAAA ATCCCTGAGC GACAAGGGCA TGGTCTTCAA CATGGTCAAG
ACCGACAGCT TCCGCAGCCG TCTGCGCCAG GCCGGTTTCT ATGGCGAATG GAAAGCCAAG
TTTGGCCACG ACGCCTGGGC CGTTCTGGAG CGCCACAGCG GCCAACTGGC CTGA
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| Protein sequence | MAIARRTLLR STAAVVALPG VIERAFAQKA EFTYKYANNL PATHPMNLRA KEMAAAVLAE
SKGRVDIQVF PANQLGNDTD MLSQLRAGGI EFFTLSGLIL STLVPGAAIT GLGFIFADYD
SVWKALDGEL GGHVRKEIGK SGLVVMEHIW DNGFRQITSS GKPIHSADDL KGFKIRVPVS
PMWTSLFKAF DSSPASINFA EVYSALQTKV VDGQENPLAV IETAKLYEVQ KYCSMTNHMW
DGFWFLANRR AWERLPDELR ALLARHIDGA ALKQRADVAA LNARLQKSLS DKGMVFNMVK
TDSFRSRLRQ AGFYGEWKAK FGHDAWAVLE RHSGQLA
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