Gene Veis_4794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4794 
Symbol 
ID4695124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5293814 
End bp5294521 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID639852534 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_999504 
Protein GI121611697 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.108923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0322253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC AAGACATGTC CATCATCTCC CTGATGCTGC ACGCCAGTTG GATGGTGCAA 
CTCGTGCTGC TGCTGCTGCT GAGCGTGTCG ATCGCCAGTT GGGCGGCGAT CTTGCGCAAG
CTGTTTGCGC TGGCGCGCAT CAAAGCCCTG AACGAGGAAT TCGAGCGCGA ATTCTGGTCC
GGCGCCAGCC TGAACGACCT GTACGCCAAC GCCACCCGCA ACGCCAGACA GGCCGGCCCG
ATGGAGCGCA TCTTTGCCAG CGGCATGCGC GAGCACCAAA AACTGCGCGA GCGCCGCATC
GCCGACCCCG GCACCCTGCT CGACGGCGCG CGCCGCGCGA TGCGCGCGAG CTTTCAGCGC
GAGATGGATG TGGTCGAATC CAGCCTGTCG TTCCTGGCCT CGGTAGGCTC GGTGTCGCCG
TATGTGGGCC TGTTTGGCAC GGTGTGGGGC ATCATGCACG CCTTCACCGG CTTTGCCGGC
ATGGCGCAGG TGACGCTGGC CACGGTGGCC CCCGGCATTG CCGAAGCCCT GGTGGCCACG
GCCATCGGCC TGTTTGCCGC GATTCCGGCG GTGATCGCCT ACAACCGCTT TGCACGCGAC
ATCGACCGCG TGGCCACGCA CCAGGAGACC TTCATCGAGG AGTTCTCCAA CATCCTGCAA
CGCAATCTGG GCGCCCATGT CGCCCATGCC GCAGCCCCGG GCCACTGA
 
Protein sequence
MNSQDMSIIS LMLHASWMVQ LVLLLLLSVS IASWAAILRK LFALARIKAL NEEFEREFWS 
GASLNDLYAN ATRNARQAGP MERIFASGMR EHQKLRERRI ADPGTLLDGA RRAMRASFQR
EMDVVESSLS FLASVGSVSP YVGLFGTVWG IMHAFTGFAG MAQVTLATVA PGIAEALVAT
AIGLFAAIPA VIAYNRFARD IDRVATHQET FIEEFSNILQ RNLGAHVAHA AAPGH