| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4787 |
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| Symbol | |
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| ID | 4694528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 5284893 |
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| End bp | 5285897 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639852527 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_999497 |
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| Protein GI | 121611690 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.495822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGCA TTATAGGGGC CAAACCGCCC TCCGACCGCA GTGTCCCCGC AAGTCCTGTG
GCGGCCCGCC TGGTGCAGGT CGACGGCGCC AGCGCAGGCC AGCGGCTCGA CAATTTTTTG
CTGCGCCAGC TCAAGGGCGT GCCCAAGACC CATGTCTACC GCATCATCCG CAGCGGCCAG
GTGCGCATCA ACAAGGGCCG GGCACACGCC GACACCCGCG TGCAGGCAGG CGACATGGTG
CGCCTGCCGC CGCTGCGCAT CTCCGACGCC GTGGCCCAAA AGGCCGAACA CCCGGCGCCG
GCGCGGGAGT TTCCCATCCT TTGGGAAGAC GAACACCTGA TCGCCATCGA CAAACCCGCA
GGCGTGGCCG TGCATGGCGG CAGCGGCGTC AGCTTTGGCG TGATCGAGCA ACTGCGCCAG
GCCCGGCCGG ACGCCCCATT TCTGGAACTG GTGCACCGGC TCGACCGCGA AACCTCGGGC
ATCTTGCTGG TGGCCAAAAA GCGCTCCGCG CTCACGCATC TGCAAGCGCA GTTGCGCGCG
CGCACGACCG GCAAGACCTA TCTGGCACTG GTGGCGGGCG CCTGGCCGGC GCACCAAAGG
GTCATCGACC TGCCGCTGCA CAAATACCTG CAAGCCGACG GCGAGCGCCG CGTGCGTGTG
ACCACGGCCG ACGACCCGCA CGGCATGCGC TCCATCACCC TGGTCCGGCC GCGCGGCAGT
TGGCCCGCGC GCGCGGGCCT GCCCGCGCTG CAACTGCTGG AGGTGACGAT CAAGACCGGC
CGCACGCACC AGATCCGCGT GCACCTGGCC AGCCAGGGGC ATGCCATCGC GGGGGACGAC
AAATACGGGG ATTTCGAGCT CAACAAGCGC ATGCAAAAGC AGGGTCTCAA GCGCATGTTT
TTGCATGCTT GGCGGTTACA GTTCAAGCAC CCCGCTTCGG GCGAGCCTGT CGCCCTGCAT
GCCGAGTTGG CGCCCGAACT GGCCGATCTC GTCAATCCCC CGTGA
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| Protein sequence | MKRIIGAKPP SDRSVPASPV AARLVQVDGA SAGQRLDNFL LRQLKGVPKT HVYRIIRSGQ
VRINKGRAHA DTRVQAGDMV RLPPLRISDA VAQKAEHPAP AREFPILWED EHLIAIDKPA
GVAVHGGSGV SFGVIEQLRQ ARPDAPFLEL VHRLDRETSG ILLVAKKRSA LTHLQAQLRA
RTTGKTYLAL VAGAWPAHQR VIDLPLHKYL QADGERRVRV TTADDPHGMR SITLVRPRGS
WPARAGLPAL QLLEVTIKTG RTHQIRVHLA SQGHAIAGDD KYGDFELNKR MQKQGLKRMF
LHAWRLQFKH PASGEPVALH AELAPELADL VNPP
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