Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4766 |
Symbol | |
ID | 4694580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 5260539 |
End bp | 5261783 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639852507 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_999477 |
Protein GI | 121611670 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.646953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGTC TGTTCTCGCC CGCCCAATGC TGGTCTTTGG CCGACCGGTT CGCAACCCCG CTGTGGGTGT ATGACGCAGC CACCATCGTC GAGCGCATCG CCCGGCTGTC CCGGTTCGAC ACCATCCGCT TTGCGCAAAA AGCCTGCTCG AACATCCACA TCCTTGCGCT GATGCGCGCG CAGGGCGTGC TGGTCGATGC GGTCTCGCGC GGCGAGATCC TGCGGGCGCT GGCCGCCGGC TACCAGACCG GCGCCCAGCC CGCGCAGATC GTCTTCACCG CCGACCTGTT CGACGCCGCC ACGCTGGCCT GCGTCATCGA GCATCGCGTG CCGGTGAACG CCGGCTCGAT GGACATGCTG CACCAGCTAG GCCCGCGCTC GCCCGGCCAC GCGGTATGGC TGCGCATCAA CCCCGGCTTT GGCCATGGCC ACAGCCACAA GACCAACACC GGCGGCGAAC ACAGCAAGCA CGGCATCTGG CACACCGACC TGCCGGCCGC GCTCGCCGCC ATCAGGCAGC ATGGCCTGGA CCTGGTGGGC CTGCACATGC ATATCGGCTC GGGCGTGGAC TACCGCCACC TGGCGCAGGT CTGCGACGCC ATGGTGGCGC TGGTGCGCGG CGTGCGCGCG GCAGGGCATG ATCTGCGGGC GATATCGGCC GGCGGCGGCC TGTCTGTCCC GTACCGCAGC GGCGACCCGG TGGTCGACAC GGCGCATTAC CACGGCCTGT GGGAAGCGGC GCGCCAGCAG GCCCAGGCCA TCATCGGCCA CCCGCTGACG CTGGAGATCG AGCCGGGCCG CTATTTGGTG GCCGAATCGG GCGTGCTGCT CGCTGCGGTG TGCGCGACCA AGCAGGTGGG CAGCAACCAC TTCGTGCTGC TCGACGCGGG CTTCAATGAA CTGCTGCGCC CCTCGATGTA CGGCAGCTAC CACGCGATGA GCCTGCTGCG GCGCGACGGC GCCAGCGCCG CCGGGCGCCC CACCGTGGTG GCCGGCCCGC TGTGCGAAGC GGGCGACGTA TTCACGCAAA GCGGCGACGG CCTGGTGCTG CCACGCGACC TGCCCCCCGC CGAGGTGGGC GACCTGCTGC TCATCCATGA CACCGGGGCC TACGGCGCGA CCATGTCCTC CAACTACAAC ACCCGCCCCC TGAGCGCCGA AGCGCTGGTC GAAGGCGCCC AGGCCCGGCT CATCCGCCGC CGCCAGACGG TCGACGAACT GCTGGCGCTG GAACGGGGGC TTTGA
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Protein sequence | MSSLFSPAQC WSLADRFATP LWVYDAATIV ERIARLSRFD TIRFAQKACS NIHILALMRA QGVLVDAVSR GEILRALAAG YQTGAQPAQI VFTADLFDAA TLACVIEHRV PVNAGSMDML HQLGPRSPGH AVWLRINPGF GHGHSHKTNT GGEHSKHGIW HTDLPAALAA IRQHGLDLVG LHMHIGSGVD YRHLAQVCDA MVALVRGVRA AGHDLRAISA GGGLSVPYRS GDPVVDTAHY HGLWEAARQQ AQAIIGHPLT LEIEPGRYLV AESGVLLAAV CATKQVGSNH FVLLDAGFNE LLRPSMYGSY HAMSLLRRDG ASAAGRPTVV AGPLCEAGDV FTQSGDGLVL PRDLPPAEVG DLLLIHDTGA YGATMSSNYN TRPLSAEALV EGAQARLIRR RQTVDELLAL ERGL
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