Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4591 |
Symbol | |
ID | 4692721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 5084993 |
End bp | 5086546 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639852336 |
Product | extracellular solute-binding protein |
Protein accession | YP_999307 |
Protein GI | 121611500 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0777489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAT CTTCTTTCTC CATGCGCTGG GCATCCGCAC TGCTGGGCCT GGCCGCGCTC GCCGCCTCGG GCTCGGCACT GGCTGCCAAA GACGTGGTGC TGGCCATCGG CTACCAGCCG GAAACGCTGG ACCCGTACAA CACCAACACG ACCATCACCA CGGCCGTGAC CAAGACCTTC TACGAAGGCC TGTTCCAGTT CGACAAGGAC CTGAAGGTGC AGAACGCGCT CGCCGAGGGC TACGAGGTCT CCAAGGACGG CCTGGTCTAC ACCATCGGGC TGCGCAGCGG CGTCAAGTTC CACGACGGCA CCGACTTCAA CGCCGAAGCC GTGAAGGTCA CGCTCGACCG CGTGCTGAAC CAGGACAACA AGCTGCTGCG CCGCAACCAG TTCAACCGCG TCGGCAAGGT CGAGGCGCTG AATCCGAGCA CCGTGCGCAT CACGCTCAAG GAGCCCTTCG GCCCCTTCAT CCACTCGCTG GCCCACGCCT CGGCCGCGAT GATCTCGCCG GCCGCGCTCA AGAAGTGGGG CAACAAGGAC ATCGCCTTCC ACCCCGTGGG CACAGGCCCC TTCGAGTTCG TCGAGTGGAA GCAGACCGAC GCGGTCAAGG CCAAGAAGTT CGACGGCTAC TGGAAGAAGG GCTTTCCGAA GATCGACAAC CTGCAGTGGA AGCCGGTGCT CGAAAACAAC ACGCGCGCCG CGATGCTGCA GACCGGCGAA GCCGACTTTG CCTTCCCCAT TCCCTACGAG CAGGCCGAGC TGCTGAAGAA GAGCGACAGG CTCGAAGTGA TGGCATCGCC CTCGATCATC ATGCGCTTCC TGGCCTTCAA CATGCTGCAA AAGCCGTATG ACAACCCGAA GGTGCGCGAA GCCATCGGCT ACGCCATCAA CAAGGAAGCG CTGGCCAAGG TGGCCTTCGG CGGCTATGCG ATTCCTGCGC AAGGCGTGCT GCCCCAGGGC GTGAAGTTCG CCGAAAAGAT GGCGCCCATT CCCTACGACG TGAAGAAGGC CAAGGCCCTG CTGGCCGAAG CCGGCTACCC GAATGGCTTC GAGTCGGTGC TGTGGGGCGC CTACAACAAC ACGACCAGCC AGAAGACGAT CCAGTTCGTG CAGCAGCAGC TCGCACAGGT GGGCATCAAG CTGCAGGTGC AGGCGCTCGA AGTGGGCCAG CGCACCGAGA TGGTCGAAGC CTGGCCCGAT CCGAAGACGG CCAAGGTGCG CATGTACTAC ACGGGCTGGT CGTCGTCCAC GGGTGAAGCC GACTGGGGTC TGCGCCCGCT GTTCGCCTCC GAATCGTGGG CGCCGAAGCT CAACAACATG TCTTTCTACA AGAGCGACGT GGTCGACAAC GCACTCGCCA AGGCGCTGAT CACGGTGGAC GACAAGGAAA AGGCCGCGCT CTACAAGACC GCGCAGGAAG AGATCCGCAA GGACCTGCCG CGCGTGCCGC TGGTCACCGA GCAGAACCTG TCGGCGCACG CCAAGCGCCT GTCGGGTGTC TACGTCATGC CTGACGCGAA CATCAACTTC GACGCGATTG CCGTGTCGAA CTGA
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Protein sequence | MKQSSFSMRW ASALLGLAAL AASGSALAAK DVVLAIGYQP ETLDPYNTNT TITTAVTKTF YEGLFQFDKD LKVQNALAEG YEVSKDGLVY TIGLRSGVKF HDGTDFNAEA VKVTLDRVLN QDNKLLRRNQ FNRVGKVEAL NPSTVRITLK EPFGPFIHSL AHASAAMISP AALKKWGNKD IAFHPVGTGP FEFVEWKQTD AVKAKKFDGY WKKGFPKIDN LQWKPVLENN TRAAMLQTGE ADFAFPIPYE QAELLKKSDR LEVMASPSII MRFLAFNMLQ KPYDNPKVRE AIGYAINKEA LAKVAFGGYA IPAQGVLPQG VKFAEKMAPI PYDVKKAKAL LAEAGYPNGF ESVLWGAYNN TTSQKTIQFV QQQLAQVGIK LQVQALEVGQ RTEMVEAWPD PKTAKVRMYY TGWSSSTGEA DWGLRPLFAS ESWAPKLNNM SFYKSDVVDN ALAKALITVD DKEKAALYKT AQEEIRKDLP RVPLVTEQNL SAHAKRLSGV YVMPDANINF DAIAVSN
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