| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4568 |
|---|
| Symbol | |
|---|
| ID | 4694013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5057306 |
|---|
| End bp | 5059222 |
|---|
| Gene Length | 1917 bp |
|---|
| Protein Length | 638 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639852313 |
|---|
| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| Protein accession | YP_999284 |
|---|
| Protein GI | 121611477 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0427886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA ACGCCCAGCC CACCCTGCCC GCCCGGCCTC TGGATGAGGC CGGGGCGCCC
GTGCCCGAGG CCCCCCCCGG GGCACCCCGC GTAAAACCCC CGGTCAATCC CCCGGTCAAC
CCCCCGGCCA TCTCCGCCGC GCAGGCCGCT GCCGATTTCG TCGCGCAGAT CTTTGCCTCC
GTGCCGGCCC CCGAGGAGGC TGCGCCGGCC ATGCCGCTGG CCATCGATCC GGCCATCAAC
CCGGTCATCA ACCCGGCCAT GCCCCCGGCC GAGGTGCCCG GCGCGCTGGC GGCCGAGCCG
CTGCGGCGGC CCGGCGCAGA CCTCCGGCAG GCGCTGCAAG ACCAGCGCAT CCTGATCCTC
GGCCTGGGGG CATCGGGCCT GGCGATGGCG CGCTGGTGCC TGCGCTGCGG CGCGCAGGTC
ACCGTGGCCG ATACCCGTGC CGCGCCCCCG CAACTGCCGG CGCTGCAACG CGAACTGCCC
CGGGCGCGCT TCGTGCCCGG CGCCTTCGAT GCCGGCCTGG TCGAGGGGCA GAACCTGCAC
GCGGTGTACT GCTCGCCGGG CCTGAGCCCG TCCGCCGTGG CCGCCGTGGC GCAGACATGC
AGCGCCCATG GCATCGGCAT GGGCGGCGAG TTGGACCTGT ATGCGCTGGC GCTGGCCGGG
CTGCGCGCCG CCGATGGCTA CGCGCCGACC GTGCTGGCCA TCACCGGCAC CAACGGCAAG
ACCACCGTGA CCGCGCTCAC CGGCCAGTTG CTCCAGCGCG CCGGCCGCAG CGTGGCGCTG
GCCGGCAATA TCGGCCCGAC CCTGCTCGAC ACGCTGGCCG GGCATATCGA CGCCGGCACC
CTGCCTGCGG TGTGGGTGCT GGAGCTATCG AGCTTTCAAC TCGAGCGCAG CACCGGTTTC
GAGCCGACGG CGGCAGCGCT GCTCAACATC AGCCAAGACC ATCTGGACTG GCATGGCGAC
ATGGCCGCCT ACGCGGCGGC CAAGGCGCGC ATCTTCGGCC AGACCGCGCT GATGGTTCTG
AACCGCCAGG ACGCTGCGGT GATGCAGGTG TCGGCGCCTT CTGCGCCTTC TGCGCCGGTA
ACGCCAGCGC TGCGGCCCCG GGCGGCCAAA GCACCGGCGC CGCAGCCACG CGCGGACATC
ACTTTCGGCG CCGACATGCC GGCACGCGCC GGCGACTTCG GCATCGAGCT CGTGGGCGGC
ATGCCCTGGC TGGTGCGGGC CAGCGCCGCC GACGAAACGC AGCGCGCGCG CCGCCGCCCC
GGGCCGCCCG GCGCAGTCCC CGCCCAAGAA CTACAGATTC AGCGCCTGAT CCCCGCCGAC
GCACTGCGCA TCCGTGGCCG GCACAACGCC GTCAACGCGC TGGCCGCGCT GGCGCTGGCC
TGCGCCGCTG GCTGCCCGCT GGCGCCGATG CTGTACGGTC TGCGCGCCTA CCGGGGCGAG
CCGCACCGTG TCGAATCCGT GGCCTGCATC GATGGCGTGG AGTTCTTCGA CGACAGCAAG
GGCACCAACG TGGGCGCCAC GGTGGCGGCC ATCGACGGGC TGGGCGCGCA GGGCGGGCCG
GGCGCCGGGC GCCGCCTGGT CGTCATCGTG GGCGGCCAGG GCAAGGGGCA GGACTTTGCG
CCGCTGGCCG CGCCGCTGGC GCGCCACGCC CGCGCAGTGC TGCTGATCGG CTGCGACGCG
CCGCTGATCC GCGCCGCGCT GCAAGACATC GGCGTGCCGC TGCTGGACGC GCCCACCCTG
CCCGGGGCCG TCGAACTGGC CGCGCAGCAC GCGCAGCCGG GCGACGCGGT GCTGATGTCG
CCGGCCTGCG CCAGCTTCGA CATGTTCCGG GACTACGAAC AGCGCGCGCA GGTTTTTTGC
GCCAGCGTGC GCGCATTGGC CGAGGCAGCC GGCCAGCCGA TGGAGGGTCT GGCATGA
|
|---|
| Protein sequence | MNPNAQPTLP ARPLDEAGAP VPEAPPGAPR VKPPVNPPVN PPAISAAQAA ADFVAQIFAS
VPAPEEAAPA MPLAIDPAIN PVINPAMPPA EVPGALAAEP LRRPGADLRQ ALQDQRILIL
GLGASGLAMA RWCLRCGAQV TVADTRAAPP QLPALQRELP RARFVPGAFD AGLVEGQNLH
AVYCSPGLSP SAVAAVAQTC SAHGIGMGGE LDLYALALAG LRAADGYAPT VLAITGTNGK
TTVTALTGQL LQRAGRSVAL AGNIGPTLLD TLAGHIDAGT LPAVWVLELS SFQLERSTGF
EPTAAALLNI SQDHLDWHGD MAAYAAAKAR IFGQTALMVL NRQDAAVMQV SAPSAPSAPV
TPALRPRAAK APAPQPRADI TFGADMPARA GDFGIELVGG MPWLVRASAA DETQRARRRP
GPPGAVPAQE LQIQRLIPAD ALRIRGRHNA VNALAALALA CAAGCPLAPM LYGLRAYRGE
PHRVESVACI DGVEFFDDSK GTNVGATVAA IDGLGAQGGP GAGRRLVVIV GGQGKGQDFA
PLAAPLARHA RAVLLIGCDA PLIRAALQDI GVPLLDAPTL PGAVELAAQH AQPGDAVLMS
PACASFDMFR DYEQRAQVFC ASVRALAEAA GQPMEGLA
|
|---|
| |