| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4426 |
|---|
| Symbol | |
|---|
| ID | 4695119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4875933 |
|---|
| End bp | 4876904 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639852175 |
|---|
| Product | methylthioadenosine nucleosidase |
|---|
| Protein accession | YP_999147 |
|---|
| Protein GI | 121611340 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.640886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.632823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCACA CCGCGCACGC GCCACGCCCT GGCCTGATCC AACGCAGCAT CCGCCGGCTG
GGCCTGTGGG CGCTGGCCAT GCTCGTCACC GGCTGCGCGT CGGTGCCGCC CGACAAGCAG
GCGCTGCGGC TCGATGACCA GCCGCGCATC GCCGTGATCT CGGCCTTTGC GCCCGAACTC
GCGCTGCTGC TGGCGCAGTT GCAGCAGCCG GTGTCGCACC GCATCGGCGG CGTGGAGTTC
AGCACCGGCC TGTTGGCCGG CAAGCCGGTG GTGCTGTTCC TGTCGGGCAT AAGCATGACC
AATGCGGCGA TGAACACGCA GCGGGTGCTG GACCGCTTCG ACATCAGCCA CATCATGTTC
AGCGGCATCG CCGGCGGCGT GAACCCCGGC CTGCATATCG GCGATGTCAG CGTGCCGGCG
CAGTGGGGCC AGTACATGGA ATGGCTGATG GCCCGCGAAG GCCCGCCCGG CCAGTACAGC
GTGCCGGAAT GGATGAAAAG CGAACTGCTG CCCCTGCCGG CCTTCGGCAT GATGCACCCG
CGTTCGGTGC AAGTGCGCTC GGCCGCCAGC CCGCAGATCA GCCAACAGTT CTGGTTTGCC
GCCGATGCCC GGATGCTGGC GCTGGCGCGC AGCCTGCAAG ACATCGATCT GGCGCATTGC
CACGCCGGCC AATGCCTGCA ACGGCGCCCG CGCGTGGTGG TGGGCGGCAA CGGCGTATCC
GGCCCGGCCT TCGTGGACAA CAAGGCGTTT CGCGAATACA CGTTCAACAC CTTCGAGGCC
CAGGTGCTGG ACATGGAAAC CGCCGCCACC GCGATGGTCG CGCATGGCAA CGGCGTGCCT
TTCATCGCCT TCCGCTCGCT CAGCGATCTG GCCGGCGGCG GCGCGGGCGA CAACGAGATG
GCGACCTTCA TGCAGTTGGC CGCAGCCAAT TCGGCCAAGG TGCTGCTGGC CTTTCTCGCC
GCCTGGCAAT GA
|
|---|
| Protein sequence | MHHTAHAPRP GLIQRSIRRL GLWALAMLVT GCASVPPDKQ ALRLDDQPRI AVISAFAPEL
ALLLAQLQQP VSHRIGGVEF STGLLAGKPV VLFLSGISMT NAAMNTQRVL DRFDISHIMF
SGIAGGVNPG LHIGDVSVPA QWGQYMEWLM AREGPPGQYS VPEWMKSELL PLPAFGMMHP
RSVQVRSAAS PQISQQFWFA ADARMLALAR SLQDIDLAHC HAGQCLQRRP RVVVGGNGVS
GPAFVDNKAF REYTFNTFEA QVLDMETAAT AMVAHGNGVP FIAFRSLSDL AGGGAGDNEM
ATFMQLAAAN SAKVLLAFLA AWQ
|
|---|
| |