Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4418 |
Symbol | |
ID | 4694613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4869026 |
End bp | 4869682 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639852167 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_999139 |
Protein GI | 121611332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.651283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC TGCGCCTGAG CACGCTGCCA CTGGCCGGTC TGCTGCGCGT GCAGCGCCAG CCGCTGGTGG ACGAGCGCGG AGCCTTCGCG CGCCTGTTTT GCGCGCAGGA ACTGCGCGAC GGGATGCTCG ACGGGATGCC CGACGGGGCT GCTGGAGTGG CTGGCGCGGC GCCCGGCGCG GCGGGCAATG GGCCGCCCCA TGGACCGACC GCCTGGCTGG CGCCCCCGGC GCAGATCGCA CAGATCAACC ACAGCCACAC CGCGCTGCGC GGCACGCTGC GTGGCCTGCA CTACCAGCGC CCGCCACATG CCGAAGGCAA ACTGGTCAGT TGCCTGCGCG GCGCGGTCTG GGATGTGGCG CTGGACCTGC GCCAAGGCTC GCCGACCTTT TTGCACTGGC ACGCCGAATG CCTGTCGGCC GACAACGGCT GCGCGCTGCT GATCCCGCCG GGCTTTGCCC ATGGCTTTCA GGCACTGACC GATGACGCCG AACTGCTGTA CTGCCACTGG TGCGCCCATG CGCCGGCGGC GCAGGCCGGG CTGCACCCGC TGGAGCCTCG GCTGGCGATT GGCTGGCCGC TGCCTGCGGG CCGCATCTCG CCGCGTGACG CGGGCCAGGC CTGGCTGACA CCAGACTTTC AGGGGCTGTG CCTGTGA
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Protein sequence | MSRLRLSTLP LAGLLRVQRQ PLVDERGAFA RLFCAQELRD GMLDGMPDGA AGVAGAAPGA AGNGPPHGPT AWLAPPAQIA QINHSHTALR GTLRGLHYQR PPHAEGKLVS CLRGAVWDVA LDLRQGSPTF LHWHAECLSA DNGCALLIPP GFAHGFQALT DDAELLYCHW CAHAPAAQAG LHPLEPRLAI GWPLPAGRIS PRDAGQAWLT PDFQGLCL
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